Gene Cphy_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0884 
Symbol 
ID5741756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp1135340 
End bp1135951 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content37% 
IMG OID641291997 
ProductSNARE associated Golgi protein 
Protein accessionYP_001558009 
Protein GI160879041 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.141066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCTG TTGTCCGTTT TATCTATGAA AATGGACTTT TTGCCATGTT TCTTATTATT 
CTACTTGAAT ACGGTTGCTT TCCAATCTCT AGCGAGATTG TCTTACCTTT TTCTGGTGCT 
GTTGCATCTC TTCAAAATAT ACCATTCTTT CTTATGCTTC CAGTTAGCGT ATGTGCTGGA 
ATTATTGGAA CAAGTTTCTG TTACTTCGTT GGTAGAATCG GTGGACATTG TATCTTAGAA 
AAACTTACGA CGAAGTTTCC AAAAACGAAG AAAAGCATCG ATGCCTCCTA CCAGCGTTTT 
GATCGCTATG GTCCCTATGT CGTTTGCTTT GGACGAATGG TTCCAATTAT CCGTACTTAC 
ATAGCGTTTG TAGCAGGAGC AGTGAAACAG CCCTATCCCG TATTCGCCTT ATTCTCTATC 
ATAGGTATTA CTTTATGGAA TTCCTTGTTA ATCGGTATTG GATATGTCCT TCGCAGTAAT 
TGGTCCAATA CTGTTACATA TTATGCAAAA TACAAAGATA TTCTGATTCC GGTACTTCTG 
TTAGTAATTT TATTTTTGAT AGCCCGAAAG ATTCGTAAGA AAAAACGTAT GCAAGAAATT 
AAAGAAAAGT AA
 
Protein sequence
MDSVVRFIYE NGLFAMFLII LLEYGCFPIS SEIVLPFSGA VASLQNIPFF LMLPVSVCAG 
IIGTSFCYFV GRIGGHCILE KLTTKFPKTK KSIDASYQRF DRYGPYVVCF GRMVPIIRTY 
IAFVAGAVKQ PYPVFALFSI IGITLWNSLL IGIGYVLRSN WSNTVTYYAK YKDILIPVLL 
LVILFLIARK IRKKKRMQEI KEK