| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0883 |
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| Symbol | |
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| ID | 5741755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1133655 |
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| End bp | 1135010 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291996 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001558008 |
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| Protein GI | 160879040 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000230192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA AAACATATAT AAATGATATG ACTGAGGGGA GCCCTACAAG GCTATTGGTA
CACTTTGCTG TACCAATGCT AATTGGTAAT TTATTTCAAC AGCTCTATAG TATGGTGGAT
TCCATTGTAG TGGGTAATGT CAATGGTGAC AGTGCACTTG CTGCTGTAGG CGCAACCTGG
GCCCTAAACT TTTTAATAAT ATCCCTTACA ATGGGGTTGG CAGCAGGAAT CGGGATTATC
ATTTCCCAAT ATTTTGGAGC AAAAGATGAG GAAAATGTCA GACGTTCTTT TGCAACAGCA
ACTTACCTAA TTCTTATCGT CTCTGCTATC ATGGGATTAC TAGGATTTTT CTTTAGCAAG
CAACTTCTAA TAAAGTTAGA TACGCCAGTA GAGATTCTAG ATGATGCTAA TATTTATCTT
AAGATAACAT GTATTGGAAT CCTCGGTAAT GCTGGATACA ATGGTATGGC AGCAGTTATG
AGAGCATTAG GAGATTCGAA AACACCACTT CGTTACCTTG TGGTGGCTTG TGTGGTAAAT
ATAGTTCTAG ATCTTCTTTT TGTCATTGGA TTTGATTGGG GAGTTGCGGG AGCAGCGATT
GCTACGATTA TAGCACAAGC AGTATCAGGA ATAGGATGTG TCATATCCGG ATTTCGTAAA
ATACCATTAA TTCGTATGCC AATCAAAGAA TTTAAGATTG ATAAAGTTAT TATGAAAAAA
TGTATCTATC TTGGAATTCC TGCTGCATTA CAGAACTCCT TTGTTGCTAT CTCAACGATC
GTATTACAAC GTGTAACAAA TCAATACGGA AAAACGGTAG TAGCGGCAGC GACAGCTGCA
CAACGTATTG AACAGCTAGT CCTAATGCCT GGCATGTCTC TAGGTTTATC AGTAGCTTCC
TATACAGGAC AAAACATTGG TGCGATGCGT ATTGACCGAG TTAAAAAAGG ATTTTGGTCT
GCAACAAAAA TAATTGTTGT ATTTAGCTTA ATCATGATGC CTTGTATGTA TTTTTTTGGC
GGGGCTGTGA TGAAGCTATT TACGAATGTG AGCGAAGTCG CAGAAATTGG ACAAAAGGCG
GTTCGCGTTA CTTGTATGTT CTATATTCCG GTAGGTATGA TTTATGTTTC CCGTAATGTA
TTAAGTGGTG CTGGTGATAT GAAGATTCCG ATGATTATGG GAATTTCTGA AGTCCTATGC
CGTGTTATCT TTGCCAGTGT ATTAACAAAA ATTCCAGCGA TTGATTATAT GGGAATCTGG
TGGGCTACTG GACTTAATTG GTTTATAACA GGAGCAATCG GTACGATACG ATATGCTTCT
GGTAAGTGGA AGAATAAATC TGTCGTTGTA CATTAA
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| Protein sequence | MSNKTYINDM TEGSPTRLLV HFAVPMLIGN LFQQLYSMVD SIVVGNVNGD SALAAVGATW
ALNFLIISLT MGLAAGIGII ISQYFGAKDE ENVRRSFATA TYLILIVSAI MGLLGFFFSK
QLLIKLDTPV EILDDANIYL KITCIGILGN AGYNGMAAVM RALGDSKTPL RYLVVACVVN
IVLDLLFVIG FDWGVAGAAI ATIIAQAVSG IGCVISGFRK IPLIRMPIKE FKIDKVIMKK
CIYLGIPAAL QNSFVAISTI VLQRVTNQYG KTVVAAATAA QRIEQLVLMP GMSLGLSVAS
YTGQNIGAMR IDRVKKGFWS ATKIIVVFSL IMMPCMYFFG GAVMKLFTNV SEVAEIGQKA
VRVTCMFYIP VGMIYVSRNV LSGAGDMKIP MIMGISEVLC RVIFASVLTK IPAIDYMGIW
WATGLNWFIT GAIGTIRYAS GKWKNKSVVV H
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