| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0612 |
|---|
| Symbol | |
|---|
| ID | 5743526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 796578 |
|---|
| End bp | 797663 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 641291724 |
|---|
| Product | VanZ family protein |
|---|
| Protein accession | YP_001557738 |
|---|
| Protein GI | 160878770 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000542073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAT ACTTATTCCC CATAAAAATT GCAATACTTA CATTTCCATT CCTTGCCTTT
TTATTCACAT TTCCTTTTGC AATTTTTCAA TATAAAAAGC ATGGATATAT TAACAAGTTT
CGCACATTTA TTTTATATTC ATTTCTATTG TATCTATTAG TAGCTTATTA CCTGGTTATT
TTACCTTTAC CTCATGTAAG AGATGTTAAA AGTTTGCAGT CTCCGGATAC TAAGTATTTT
AACTTAATAC CATTTAAATT TGTTTCTAAT ATTATAAAGG AAACCGGTGT AAATATTAAA
GCACCTTCCA CTTATAAATA TCTTTTAACA GAAAGAGCTT TTTTGCAAGT GGCATTTAAT
GCAATTTTAC TTACGCCTCT TGGAATTTAC TTAAGATACT ACTTTAAGAA GAATATAAAA
CAAACTCTGG TTATTACTTT TTTAGTTTCA TTATTTTTTG AGATAACACA GCTCACAGCA
TTATATGGAA TATATAATGC GCCTTATAGA ATTTTTGATG TAGATGACTT GTTCTTAAAT
ACATTTGGTG GTTATTTAGG ATATATCATC GCCCCAGCGT TTACTTTCTT TCTTCCTAAT
ATGAATGAGT TAGATAAAGT AAATCCTGAA GAACTAAGAG TTGGCTATTT CAGACGGCTG
TTAGCTTTTT TAATTGATAT TTTTATTGTT GGATTGATAC CAAATGGAAA TGACAATATT
TTATTAGATG CAGTTATCTA TTTTGTATAC TTTATATTAA TTGTTTACTT TACTAACGGT
AGAACTATTG GAAAATGGCT GACATCAGTT AGCGTAAAAG GGCAACAAGA TAAATTAAGG
TTTAAAGAAG TGCTAGTAAG ATATGGTATT CTATATTTTA TAATATTTGG TAGTAACAAA
TATCTGTATA TTATATATGG GCAATACAAC GGCACAGATA TCGGATATGG TGGAGTTATT
ATATTTATGA TTCAATTCGT TTTGAATATA TTAATTGCAA TCCATATATT CCTCTGTGTT
TTAAAGAAAA GCAGATTCTT TTATGAAAAA ATTAGTAAAA CTCGTTTAGT AATATCGAGA
AAATAG
|
|---|
| Protein sequence | MQEYLFPIKI AILTFPFLAF LFTFPFAIFQ YKKHGYINKF RTFILYSFLL YLLVAYYLVI
LPLPHVRDVK SLQSPDTKYF NLIPFKFVSN IIKETGVNIK APSTYKYLLT ERAFLQVAFN
AILLTPLGIY LRYYFKKNIK QTLVITFLVS LFFEITQLTA LYGIYNAPYR IFDVDDLFLN
TFGGYLGYII APAFTFFLPN MNELDKVNPE ELRVGYFRRL LAFLIDIFIV GLIPNGNDNI
LLDAVIYFVY FILIVYFTNG RTIGKWLTSV SVKGQQDKLR FKEVLVRYGI LYFIIFGSNK
YLYIIYGQYN GTDIGYGGVI IFMIQFVLNI LIAIHIFLCV LKKSRFFYEK ISKTRLVISR
K
|
|---|
| |