| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0421 |
|---|
| Symbol | |
|---|
| ID | 5745181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 535450 |
|---|
| End bp | 536388 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641291533 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001557547 |
|---|
| Protein GI | 160878579 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000841393 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA AAGGACGTTC TTTTCTTACA TTAAAGGATT TTACACCAGA AGAAATTACG
TATTTATTAG AATTGGCAGC AACACTAAAG GAAAAAAAGA AACAAGGAAT TACCGGTAAT
AGTCTAAAGG GGAAAAACAT AGCGTTAATT TTTGAGAAAC CATCTACCCG TACCAGATGC
GCATTTACGA TTGGATGTAT TGATGAAGGT GGTCATCCTG AATATCTCGG AAAAGATGAT
ATTCAACTGG GGCATAAGGA GAGTGTGGAA GATACTGCTA GGGTGTTAGG GCGTATGTTT
GATGGAATTG AGTATCGAGG ATTTTCTCAA GAAACCGTTG AAAAGTTAGC GAAATATAGC
AAAGTTCCAG TATGGAACGG ATTAACGGAT GAATATCATC CCACGCAAAT CTTAGCAGAT
TTCTTAACAT TAAAAGAACA ATTTAAAACA TTAAAAGGGC TTAAACTAGT GTTTGTCGGG
GATGGAAGAA ATAACATGGC AAATAGTTTA ATGATTGGTT CCAGTAAGAT GGGGATCCAT
TTTACAATCT TAGCACCTAA GAGTTTATGG CCAAAGGATG AATTGGTATC ATTATGCTTA
AGTTATGCTA AAGATTCAGG TAGTAAGATT ACAATCACAG AGGATTTAGA GGCTGTTTCT
GGTGCAGATG CAATCTACAC AGATGTATGG TGTTCGATGG GAGAAGAAGA TAAGGCGGCA
GAACGTGTCG CATTATTAAA ACCATATCAA GTAAATGAAG AATTAATAAA AAAGTCAGGG
AAAGAAAGTA CGGTTTTCTT ACACTGTTTA CCCGCTGTAA AAGGAAATGA GGTTACAGAA
GAAGTATTCG AAAAGTTTGC AGATGTCGTA TTTGATGAAT CAGAAAACCG TATGCATACG
ATTAAAGCAG TTATGGTTGC AACTCTCGGA GAAGAGTAA
|
|---|
| Protein sequence | MNLKGRSFLT LKDFTPEEIT YLLELAATLK EKKKQGITGN SLKGKNIALI FEKPSTRTRC
AFTIGCIDEG GHPEYLGKDD IQLGHKESVE DTARVLGRMF DGIEYRGFSQ ETVEKLAKYS
KVPVWNGLTD EYHPTQILAD FLTLKEQFKT LKGLKLVFVG DGRNNMANSL MIGSSKMGIH
FTILAPKSLW PKDELVSLCL SYAKDSGSKI TITEDLEAVS GADAIYTDVW CSMGEEDKAA
ERVALLKPYQ VNEELIKKSG KESTVFLHCL PAVKGNEVTE EVFEKFADVV FDESENRMHT
IKAVMVATLG EE
|
|---|
| |