| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0115 |
|---|
| Symbol | |
|---|
| ID | 5744265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 155051 |
|---|
| End bp | 156268 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641291203 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001557243 |
|---|
| Protein GI | 160878275 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGTG CTAATATTAT TTTTAAAAAA GAAATGAAAC GCATTTTTCA AGATAAAAAG
ATGATATTTA GCTTATTTAT ACTTCCTGCA ATCATTATTA TCGGAATGTA TTCGTTAATT
GGGGTAATGA TGAATCGGAT GGTTGATGAT ATTAAAAAGC ATGAATCTAT CGTCTATATT
CAAAACATGC CAAAGGAATA TGAGAGTTTA CTAAAAACTT CAGGATTTTT AGAGGTTGCT
AAGGTTACCT ATCTTACCAA AGAAAGTTCC GTTAAGGAAT ATGAAAATAA GATCTTAAAG
GAGTCAATTG ATTTATTGGT ATCCTTTGAG AACAACTTTA ATAATTCAGT GGCATCTTAT
GAGAAATCAG GCGATGTTAT TCCTAAGGTA ACACTATTTT ATAATACTAC AGGGAAGTAC
TCTACAGAGG CTGAGAGCAA TTTTCGAACT TTGGTGCTAG AGCCACTACA ACAACAGTTA
TTAGCGAAGC GTTTGGGTAA TCTTGAAGTT TTGCAGGTAT TTCAGATTGC AGAGAAGGTA
ATTGTAGATG CAGATAAACA AAATGGACAG TTTTTAGCGA TGCTGTTACC ATATATGATA
ACATTTATGC TATTTGTCGG TGCTATGAGC CTTGGTGTAG ATGCCATTAC TGGTGAAAAA
GAACGCCAAA CGATGGCGAA ACTCTTATTA ACACCGATTA ACAGAAGTGA GATTGTTTTA
GGTAAATTAA GCTCTCTTGC TGTGCTATCC AGTATTTCTG CCGTAGTATA TGCCATTTCC
ATGATTATAG CGATGCCGAT GATGGAAGGG AATATGGGCT CACAGGGGGG GGCGATTAGT
GTACGATTTG GAGTGACGCA GGTAGTAGCG TTATTCATAA CTATGATTGT TATGGTCTAT
TTGTATGTCG GATTGGTTGC CCTTGTTAGT GTATTTGCAA AGACAGCGAA GGAGGCAAGC
TCCTACATAT CGCCACTTTA TATCGTAATC ATTGTGGCCG GTATGCTGAC AATGTTTCAA
GGAGGAATAG AAAAGCCTCT TTATCATTAT GCAATTCCGG TATATGGTAA CTCACTCGCA
ATTCAAAATA TTATGACAAA TGAACTTACA CTAGCTCAAT TTCTCATATC CAGCTGTTCT
ACGTTAATCC TTGCAATTCT TGTAACGATA GCAATTGCAA AAGCGTTTAA TAATGAAAAG
ATAATGTTTA ATGCATAA
|
|---|
| Protein sequence | MKGANIIFKK EMKRIFQDKK MIFSLFILPA IIIIGMYSLI GVMMNRMVDD IKKHESIVYI
QNMPKEYESL LKTSGFLEVA KVTYLTKESS VKEYENKILK ESIDLLVSFE NNFNNSVASY
EKSGDVIPKV TLFYNTTGKY STEAESNFRT LVLEPLQQQL LAKRLGNLEV LQVFQIAEKV
IVDADKQNGQ FLAMLLPYMI TFMLFVGAMS LGVDAITGEK ERQTMAKLLL TPINRSEIVL
GKLSSLAVLS SISAVVYAIS MIIAMPMMEG NMGSQGGAIS VRFGVTQVVA LFITMIVMVY
LYVGLVALVS VFAKTAKEAS SYISPLYIVI IVAGMLTMFQ GGIEKPLYHY AIPVYGNSLA
IQNIMTNELT LAQFLISSCS TLILAILVTI AIAKAFNNEK IMFNA
|
|---|
| |