| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0084 |
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| Symbol | |
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| ID | 5745011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 112892 |
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| End bp | 113914 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641291173 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001557213 |
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| Protein GI | 160878245 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGTAG TAGTTTTGGC CGGAGGATTG AGTCCGGAAA GAGAGGTATC ATTAAGTTCT
GGAAGTAAAA TTGCAAATGC GCTAATGGAA AAGGGATACG AAGTATTATT ACTTGACTTA
TATCTAGGAA TTAAGGATGT AACTAATATA GATTCCCTAT TTCGTAAAAT GGAGGATCAA
AATCCATATC AGTATCAAGT TCCTAAGGAA GAACCTAACC TTACGAAACT GAAAGAGGAT
TCCGGAAATG GTGGTATATT GATTGGAGAA AATGTCTTGT TGTTATGCCA ATATGCAGAT
AAAGTATTTT TGGCACTGCA TGGTTCTATC GGTGAAAATG GTCAGCTGCA GGCTATGTTT
GATATCTATG GAATTTCCTA TACAGGAAGT GGATACATAG GAAGCTTACT TGCTATGGAT
AAAGGATTAT CTAAAGTCAT AATGCAAAAG CATGGAATTG AGACGCCGGA TTATATTGTT
GCGGATTTAA CAGAGGAACA AGAATTAGAA AAAACGTTAA TGCTTCCTTG TGTAATTAAA
CCATTAAGCT GCGGTTCCAG TGTTGGGGTA TCCATAGTAA GAAGTCAAGA GGAATTAGGG
AAGGCTCTTG ATTATGCGAA AAAGTATGAA AATAAAGTGT TAATTGAAGA ACTCATAGTA
GGAAGGGAGT TTTCTGTTGG TATATTAAAT CATCATGCTC TTCCTTTAAT AGAGATTATA
CCAAAGACGG GATTCTACGA CTATACGAAT AAATATCAGG CGGGAATGGC GACGGAAGTA
TGTCCTGCAC AATTAGAGGA CGAAATCAGT ATAAAGATGC AGGAGGCAGC ATTAAAAGTT
CATGAGGTAT TACAACTTGG CTTTTATTCC AGAGTGGATT TCTTATTAAA AGAAGATGGA
AGTTTTTATT GCCTTGAGGC GAATACTTTA CCTGGTATGA CTCCAACCAG TTTATTACCA
CAAGAGGCAG CAGCAATAGG AATATCGTAT TCTAAGCTAT GCGAACTAAT TTTATTAGGA
TAA
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| Protein sequence | MKVVVLAGGL SPEREVSLSS GSKIANALME KGYEVLLLDL YLGIKDVTNI DSLFRKMEDQ
NPYQYQVPKE EPNLTKLKED SGNGGILIGE NVLLLCQYAD KVFLALHGSI GENGQLQAMF
DIYGISYTGS GYIGSLLAMD KGLSKVIMQK HGIETPDYIV ADLTEEQELE KTLMLPCVIK
PLSCGSSVGV SIVRSQEELG KALDYAKKYE NKVLIEELIV GREFSVGILN HHALPLIEII
PKTGFYDYTN KYQAGMATEV CPAQLEDEIS IKMQEAALKV HEVLQLGFYS RVDFLLKEDG
SFYCLEANTL PGMTPTSLLP QEAAAIGISY SKLCELILLG
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