| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2281 |
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| Symbol | |
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| ID | 5754037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2702876 |
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| End bp | 2703925 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641288572 |
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| Product | secretion system apparatus protein SsaU |
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| Protein accession | YP_001554709 |
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| Protein GI | 160875393 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4792] Type III secretory pathway, component EscU |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0436639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.672371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGA AAACAGAAAA ACCCACAGAA AAACGTTTAC GAGAAGCGAG AAATCGCGGT
CAGGTCATTA AAAGTGCTGA AATTGTCACA GGGTTACAGA TGGCGATCAT TCTCGGATAC
TTTCTCTACG AAGGGCCAGC ACTCGTCCAA GCCATTATGG CGTTAATCGA CTTAACCATT
CACGCCATCA ATCTTCCCCT TGAAACTGCG GCCGAGCAAA TCGTTGGTAC CTTCGCCGTG
CTGGCATTAC GTTTTTTAGG TGGGCTGACA TTAGTACTCG TGTTTACCAT AGTGGTGGGG
AACTTAGTCC AAACAGGTCC CGTTTGGGCG GCTGAGTCTA TAATGCCGAG CATGGATAAA
CTCAATGTCA TGAATAATGC TAAGCAACTT ATTTCACTGA AAAGTCTGTT TGAGCTCGCT
AAAAATCTCG TTAAAGTCAC AGTGCTGAGT TTAGTGTTTT ACTATCTGCT CCATCGTTAC
GTTAACGCCT TTCAATACTT GCCTTTATGC GGAGAAGCCT GCGGTATCAG TGTGATTTCG
ACCATGATTA CTTGGCTCTG GGGCAGCTTT TTAGGATGTT ACTTAATATT TGGGATCGCT
GATTATGCAT TTCAACGCTA TAGCCTAATG AAAGAACTCA AAATGTCCAA AGATGATACC
AAACAAGAAT ACAAAGATTC TGAAGGAAAC CCCGAAATGA AACAAAAACG CCGCGAAACC
CAGCGAGAAG TGGCGTCTGG TAGTCTTGCC AGTAACGTTC GCAAAGCCAC AGTGGTTGTG
CGTAATCCAA CCCACATTGC CGTGTGTTTG TATTATAGTG AAGGTGAGAC ACCGTTGCCT
AAAGTGCTTG AAAAAGCCGA AGATCACATG GCCTTACACA TAGTGGCATT AGCTGAGAAA
GCTGGGGTGC CAATTGTCGA GAACATTCCA TTGGCCCGCG CCTTATTTAA ACACGTTGAG
GCAGGAGACG TGATTCCAGA GAGCCTATTT GAACCCGTAG CAGAGCTTTT ACGACTAGTG
ATGACAATAT CCTATGATAA TATGGAGTAA
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| Protein sequence | MAEKTEKPTE KRLREARNRG QVIKSAEIVT GLQMAIILGY FLYEGPALVQ AIMALIDLTI
HAINLPLETA AEQIVGTFAV LALRFLGGLT LVLVFTIVVG NLVQTGPVWA AESIMPSMDK
LNVMNNAKQL ISLKSLFELA KNLVKVTVLS LVFYYLLHRY VNAFQYLPLC GEACGISVIS
TMITWLWGSF LGCYLIFGIA DYAFQRYSLM KELKMSKDDT KQEYKDSEGN PEMKQKRRET
QREVASGSLA SNVRKATVVV RNPTHIAVCL YYSEGETPLP KVLEKAEDHM ALHIVALAEK
AGVPIVENIP LARALFKHVE AGDVIPESLF EPVAELLRLV MTISYDNME
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