| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1313 |
|---|
| Symbol | |
|---|
| ID | 5753041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1555455 |
|---|
| End bp | 1557182 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641287583 |
|---|
| Product | PepSY-associated TM helix domain-containing protein |
|---|
| Protein accession | YP_001553748 |
|---|
| Protein GI | 160874432 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.753678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.331666 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTTTGCT TCAGGTGTGT GGACAGTAAG ATGAAAGAGA CATTTTTTAG AACCTTATCT
TGGCTACATA CTTGGGCAGG CTTGCTCGTG TGCTGGGTGT TATTGTTGAT CTTTTTTGCG
GGTAGCTTGA GCTATTTCCG CCATGAAATC AGCCTTTGGA ACGAACCCGA ATTACACCAA
GGGGTTTATC AAGACTATCA AGCCGATACG CTCGCAAATC AGCTGGATAA AGGCCAAGAT
TATATCGCAG CGCATTCGCC CGAATCGGCG CAGCGCTGGA TGATAGGTTT TCCGACCGAA
CGTAAGCCCT TTCAAAGTGT GAGTTGGCAA TTGCCACCAG AAAAAGGTCA ACGTCGCGGC
AAAACAGAAG AACATGTGGC CCTCGCCGAT GGCAGCGGCA TGATCTCAGA AGTGCGCGCA
AGTCGTGGCG GCGATTTCTT CTATCGTCTG CATTTTGACT TGCATTATAT GTCCGCAATT
ACAGCCCGAT ATATCGTCGG CGTTTGTACT ATGTTTATGC TAATTGCCCT TATCAGCGGC
ATAGTGATCC ACAAGCGGAT CTTTAAGGAT ATGTTCAGCT TTAGACGCGA CAAGGGCGCC
CGCTCTTGGT TAGATGCACA CAATGTGAGC TCTGTCATCG CCCTGCCCTA CCATCTGATG
ATCACTTATA CCGGGCTTAT CACCCTGATG TTGATCTATA TTCCGTGGAC GGTGGATACC
GCCTATTCGG GTGACAACCA AGCCTTTTTA AAAGAGCTAA ACCCCGCCAG ACAAACCGAG
AAAGCCACGG GGATTAGCGC GCCACAGGTG CAGCTGAGTC AATTACTGCC GCAGGTGCAA
GCCGCTTGGG GCGATGCGCC AATTAAGCAA GTGATAGTCT CATACCCTAA CGATCAAAAT
AGCCAAGTGA CCTTTTACCA AAACACAGGT AAAGATGTGA CCGATGAGGC CAACATTTTG
ATATTTAACG GGGTCAATGG TGAGCTTAAG TATGCCAGCC CGCATGAAGC CTCGGGGGCG
TCAGTCACCT ACGACACTAT GATGTCGCTA CACACGGCGC GTTTTGCCGC CCCACTATTA
CGAATATTAT TCTTTTTCTG CGGCTTATTA GGTTGCGCTA TGGTCGCTAC AGGCACTTTG
ATGTGGGCCA TTCGCCTACG TCAAAAACAA CAGAAAGCTA TAGATAAAGG CGAGAAACCA
AGCTTGGGAT TACGTCTCGT CGAAGGGTTA AACTTCATGT TTATCTTAGG ATTACCCTTA
GGCGCTGTGA GCTTCTTTTA CGCAAATCGT CTGCTATCGA CAAGTTTTGC AGGCCGCTCC
GAATGGGAAG TTCACAGCTT CTTTATCGCG TTAGCGGCAA TGGGAGTGTG GGCTTTCTTT
GGCCGTTCAC GTCGCCAGTG GCAAGCAGCA TTGATAATCA CAGGCAGTTT GTGCTGTGCA
CTGCCCGTGC TCAATGCCTT CACATCGCCG AGCAATCTCA TCGATAATAT CCAATCCCAT
CAATGGCCTT TAGTCGGATT TGACGTGCTC GCCATTCTAC TTGGCGGCGC TATGCTATTT
GCCAGCAAAA GATTAACTTT AATTGCTAAA GCCCCAGCCA AGCGCCCAGC AAGACCCGCA
TTCAATGCGC CGAATACCAA GGCGAATAAA GCACGCCGCA GCGAGCCACA AACATCCCTA
GCCAACGAAC TTACCTCGCC GTCTTCATTG GAGGAAGCCA AATCATGA
|
|---|
| Protein sequence | MVCFRCVDSK MKETFFRTLS WLHTWAGLLV CWVLLLIFFA GSLSYFRHEI SLWNEPELHQ
GVYQDYQADT LANQLDKGQD YIAAHSPESA QRWMIGFPTE RKPFQSVSWQ LPPEKGQRRG
KTEEHVALAD GSGMISEVRA SRGGDFFYRL HFDLHYMSAI TARYIVGVCT MFMLIALISG
IVIHKRIFKD MFSFRRDKGA RSWLDAHNVS SVIALPYHLM ITYTGLITLM LIYIPWTVDT
AYSGDNQAFL KELNPARQTE KATGISAPQV QLSQLLPQVQ AAWGDAPIKQ VIVSYPNDQN
SQVTFYQNTG KDVTDEANIL IFNGVNGELK YASPHEASGA SVTYDTMMSL HTARFAAPLL
RILFFFCGLL GCAMVATGTL MWAIRLRQKQ QKAIDKGEKP SLGLRLVEGL NFMFILGLPL
GAVSFFYANR LLSTSFAGRS EWEVHSFFIA LAAMGVWAFF GRSRRQWQAA LIITGSLCCA
LPVLNAFTSP SNLIDNIQSH QWPLVGFDVL AILLGGAMLF ASKRLTLIAK APAKRPARPA
FNAPNTKANK ARRSEPQTSL ANELTSPSSL EEAKS
|
|---|
| |