| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0492 |
|---|
| Symbol | |
|---|
| ID | 5752209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 562316 |
|---|
| End bp | 563254 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641286754 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_001552930 |
|---|
| Protein GI | 160873614 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0661891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTC CATTAGATAC AGATTTGATT GTGATGGCAA TTTGGGGACT GATTTTTGCC
ATTTTCGTGA TTAAGCTTTT CCAATCAATT CGCCTAGTAC CCACTAAATC GGCTTATATT
GTTGAGCGTT TAGGTAAGTA CCACAGCACC TTAGATGCGG GTTTCCATAC CTTGATCCCC
TTTGTGGACA AAGTCGCTTT CATTCATGAT TTGAAAGAAG AGACCATCGA TGTACCGCCG
CAGGAGTGTT TTTCGAGCGA CGAAGTTAAC GTTGAAGTGG ACGGGGTGAT TTATATCTCT
GTGACCGACC CAGTCAAAGC CAGTTACGGT ATTACCGATT ATCGCTACGC GGCTATCCAG
TTGGCGCAAA CCACCACACG CTCTGTCATT GGGACGCTGG ACCTTGACCG CACGTTCGAA
GAGCGTGATG TGATTTCTGC CAAGGTCGTG CAGGTATTAG ATCAAGCCGG TGCCATGTGG
GGAATACGCG TGCATCGTTA TGAGATTAAA AATATCACCC CACCTGAAAC CGTTAAAAAT
GCCATGGAAA TGCAAGTGAA TGCTGAACGT GAGCGCCGGG CATTATTGGC TAAGAGTGAA
GGCGACAAGC AGAGCAAGAT TAACCGTTCA GAAGGTGTTA AAGCTGAGAC GGTAAACCGC
TCTGAAGGTG AGATGCAGCG ACGTATTAAC GAAGCTGAAG GTAAGGCTGA GGAAATTTTA
ACTATTTCCC GTGCGACGGC GGAATCGATC GAACGTCTTG CCACAGTTAT TGCTGCGCCG
GGTGGCCACA ATGCCCTGCG GATGCAACTT GGTGAACAGT ACTTTAAACA GCTCGATGGC
TTAAGCCAGA AGAATAGCCG AGTGGTATTG CCGGGTAATA TGGTGGATTT CGATTACTGG
ATGAATAGCA TAGGCTTAAC GGAAGAAAAG CCGAGCTAA
|
|---|
| Protein sequence | MNIPLDTDLI VMAIWGLIFA IFVIKLFQSI RLVPTKSAYI VERLGKYHST LDAGFHTLIP
FVDKVAFIHD LKEETIDVPP QECFSSDEVN VEVDGVIYIS VTDPVKASYG ITDYRYAAIQ
LAQTTTRSVI GTLDLDRTFE ERDVISAKVV QVLDQAGAMW GIRVHRYEIK NITPPETVKN
AMEMQVNAER ERRALLAKSE GDKQSKINRS EGVKAETVNR SEGEMQRRIN EAEGKAEEIL
TISRATAESI ERLATVIAAP GGHNALRMQL GEQYFKQLDG LSQKNSRVVL PGNMVDFDYW
MNSIGLTEEK PS
|
|---|
| |