Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4969 |
Symbol | |
ID | 5736805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6304890 |
End bp | 6306644 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641282136 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001547727 |
Protein GI | 159901480 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.465149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACGT TTACGGAACT TGGGCTAGGC GAAGCGACGT TGCGGGCAAT TACTGAACTT GGCTATGAAG AACCAACTCC AATCCAAGCC CAAAGTATTG GTTTGATGCT TAGTGGCAAT GATATTATTG CCCAAGCTCA AACAGGTACC GGCAAAACCG CTGCTTTTTC GTTGCCAACG ATCGAACGGA TTGATCCCAA AGCCATGGGT GTGCAAGCCT TGATCTTGAC CCCAACGCGC GAATTAGCCG TCCAAGTCTC GGATGCTATT TCAGCGTATG GCAAATATTT GAATATTCGC GCCTTGCCAG TCTATGGTGG TCAACCAATT GATCGCCAAC TTCGCGCTTT GAAGCGTGGG GTCAATATTG TCATCGGCAC ACCTGGCCGT TTGATGGACC ACATGGAACG TGGCACGCTT GATCTTTCGA CCGTGCGCAC TGTGGTGCTC GACGAAGCCG ACGAAATGCT CAACATGGGC TTTGTTGATG ATATTGAATA TATTTTGGAA CGCGCTCCCA AAGATCGCCA AACCGCTTTA TATTCAGCCA CCATGCCCGA TGAAATTGCG CGTTTGGCTC GCAAATACTT GCGCTCACCC CAAATGGTGA CGATCGAACG CGAACAATTG ACTGTACCGC AAATTCGCCA AGTCTATTAT GAAATTGGCG CACGCGATAA ATTTGAAGTG CTCACGCGGA TTCTTGACCT TGAAATGCCA ACCTCGGCGA TTATTTTCTG CCGAACCAAG GCCATGGTCG ATGAGCTTGG TGAAAAATTG TTGGCTCGTG GTTATGGCGC TGAATTGCTG CACGGCGATT TAAGCCAAGC TATGCGCGAC CGCGTGATGA AGCGCTTCCG CGAAGAACAA GTGGAAATTT TGGTCGCAAC CGACGTTGCT GCCCGTGGTT TGGATATTGA ACATGTCAGC CACGTGATCA ACTATGATAT TCCGCTTGAT CCAGAAGCCT ATGTTCACCG GATTGGCCGA ACTGGCCGAG CTGGCCGTTC AGGTGTTGCT GTAACCTTGG TAACGCCACG CGAACGCCGC CAACTGCGCA CGATCGAACG TATGACTGGT GCTCCAATTC AACGCTTACG CTTGCCAACG ATTGCCGATG TGGTTGCCCG CCGCCGCGAA GCATTCAAAG ATAACTTGCG TGAATTGATC GAGCAACACA ACGAACAGGG TGGTTTGGAG CAATATTTGG TCTTGGCTGA AGAATTGGCC GAACAATATT CACCAACCGA TTTGGCCGCT GCTGCCTTCA AGATGATGCT TGGTGAGCCA GATTTGACCG CCGAAGATCC TTTAGAAATG GTTGAAGACG AAGCCACCTT CGATGCTCGC CGTGGTGATC GCCGCGATAG CCGCGATAAT GGTCGCCGTG GCGATCGCCG CGACAATGGT CGCGCTGGTG AGCGACCTGG TGAGCGCGGT GGCGATCGGG CTGCCCGTGG GCCTCGTAGC GGTGGCGATC GCAACAACGG TGGCCGCTCG TTCCGCGAAG AAGGCATGAC CCGCTTGTTT GTAGACATTG GCCGCGAACA GGGTGTGCGC CCAGCTGATA TTGTTGGCGC AATTGCCAAC GAATCAGGCT TGCCAGGCCG TGCAATCGGC GCAATCGACA TTTTCGATAA CTTCACCTTT GTTGATGTGC CAGATGAGGC TGCGAACCGC GTGTTGGCTG CCCTTGGTCG GACCCAAATT CGCGGTGTGA AAATCACCCC AACCTTGGCC CGCCCACGTC GCTAA
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Protein sequence | MTTFTELGLG EATLRAITEL GYEEPTPIQA QSIGLMLSGN DIIAQAQTGT GKTAAFSLPT IERIDPKAMG VQALILTPTR ELAVQVSDAI SAYGKYLNIR ALPVYGGQPI DRQLRALKRG VNIVIGTPGR LMDHMERGTL DLSTVRTVVL DEADEMLNMG FVDDIEYILE RAPKDRQTAL YSATMPDEIA RLARKYLRSP QMVTIEREQL TVPQIRQVYY EIGARDKFEV LTRILDLEMP TSAIIFCRTK AMVDELGEKL LARGYGAELL HGDLSQAMRD RVMKRFREEQ VEILVATDVA ARGLDIEHVS HVINYDIPLD PEAYVHRIGR TGRAGRSGVA VTLVTPRERR QLRTIERMTG APIQRLRLPT IADVVARRRE AFKDNLRELI EQHNEQGGLE QYLVLAEELA EQYSPTDLAA AAFKMMLGEP DLTAEDPLEM VEDEATFDAR RGDRRDSRDN GRRGDRRDNG RAGERPGERG GDRAARGPRS GGDRNNGGRS FREEGMTRLF VDIGREQGVR PADIVGAIAN ESGLPGRAIG AIDIFDNFTF VDVPDEAANR VLAALGRTQI RGVKITPTLA RPRR
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