| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3713 |
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| Symbol | |
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| ID | 5735577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4670188 |
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| End bp | 4671381 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641280865 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001546477 |
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| Protein GI | 159900230 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000276005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTGG ACACCGAAAG CATGGATGCC GTTCAAGATT GGACGACACT GCTTGCTGAG
TACGATTATC AACGCCCAGA ACGCGGTCAA TTGCGTGAAG GTATCGTCAT GCGCGTCGAA
GACAGCCAAA TCTTGGTTGA CATTGGCGCA AAACACGAGG GCGTTATCCC TAACCAAGAT
CTGCGCCGTT TGCCGCCAGA ATTGGTCAGT GGGATCAAAA ACGGTGACAC ACTGCAAGTG
TACGTGATGG AGCCAGAATC AAAAGAAGGC GAACTGGTTC TTTCATTGAA CATGGTGCAG
GTCGAGCGCG ATTGGCAAGA AGCCCAAACG ATGCTCGAAA ATGGTCAAAT CATCGAAGCT
GGCGTGGTCG GCTACAACAA GGGCGGTTTG TTGGTTCAAG TTGGGCGTGT GCGCGGTTTC
GTACCAGCCT CACAAGTGGT CAACTTGCAC AGCCGCACTG GCACTGAAGG CCAACAAAGC
GCCATGACCA AGATGGTCGG CCAAAATATT CCTTTGAAAG TTATCGAAGT TGATCGCGAT
CGCAATCGTT TGGTGCTTTC AGAGCGTGCC GCTATGCAAC GCTGGCGACA ATCGCAAAAG
GAACGCTTGC TCGAAACCCT CGAACCAGGC GCAGTCGTCA CTGGTCGGGT CAACCAACTC
ACTCCATTCG GTGCTTTCAT CGATTTGGGC GGTGCTGATG GTTTGGCTCA CATCTCAGAG
CTTTCATGGC AGCGCGTCAA CCACCCACGC GAAGTCTTGC AACCAGGCCA AGAAGTCCAA
GTATACGTCT TGGAAGTCGA TCGCGATCGC GAACGGATTG GCTTGAGCTT GCGCCGTTTG
CAGCCAGATC CATGGGCAAC CATCGATCAA CGCTACGACC TCGGCCAATT GATCGTTGGT
GAAGTAACCA ACATCGCTCC TTTCGGCGTG TTTGTACGCG TTGAAGAAGG CGTTGAAGGT
TTGATCCACG CTTCAGAATT GACCGAAAAC GGCCAATCGC CCGACTCGTT GCAACAAGGC
CAACAAGTGC AAGTGAAGGT GATCAGTCTT GATCGCCAAC GCCAACGCCT TGGCTTGAGC
TTGCGCCGCG TCGATGGCGA AGGTGAAGCC GCCGAAGCAC CAGCAGCTCC TGTAGCTGAA
GTGGTCGCCG AAGCCGCTAC CGAAGCTACC ACCGAAGAAG AAGTCGGCGC ATAA
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| Protein sequence | MTVDTESMDA VQDWTTLLAE YDYQRPERGQ LREGIVMRVE DSQILVDIGA KHEGVIPNQD
LRRLPPELVS GIKNGDTLQV YVMEPESKEG ELVLSLNMVQ VERDWQEAQT MLENGQIIEA
GVVGYNKGGL LVQVGRVRGF VPASQVVNLH SRTGTEGQQS AMTKMVGQNI PLKVIEVDRD
RNRLVLSERA AMQRWRQSQK ERLLETLEPG AVVTGRVNQL TPFGAFIDLG GADGLAHISE
LSWQRVNHPR EVLQPGQEVQ VYVLEVDRDR ERIGLSLRRL QPDPWATIDQ RYDLGQLIVG
EVTNIAPFGV FVRVEEGVEG LIHASELTEN GQSPDSLQQG QQVQVKVISL DRQRQRLGLS
LRRVDGEGEA AEAPAAPVAE VVAEAATEAT TEEEVGA
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