| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2846 |
|---|
| Symbol | |
|---|
| ID | 5734727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3610294 |
|---|
| End bp | 3611301 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641279989 |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_001545612 |
|---|
| Protein GI | 159899365 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGCT GGTGGATTAT TAGCTTCCTT TCGCTGTTTA TCTTGGCAAG TTGCGGTGCT
GAACAAGCCG CCCCAACCAC CCAAGGCCAA ACCGCCAAAC TCAACGTCGT CAGTACGGTT
TCGCCAATTA CCAATATTAT CTACAACATT GCAGGCGATA AAATTAGCCT AACCGGAATT
GTGCCTGAGG GTGTGAATTC CCACACCTTC GAGCCAGTGC CTTCAGATGC CAAAACCTTG
GCCGAGGCCG ACTTAATCTT TATCAATGGC CTTAATTTAG AGGAACCAAC CCACAAATTG
GCCGAAGCCA ACAAACAACC AAGTGCCGAA ATTATCTTGC TGGGCGAGCA AACGATCACG
CCTGAGCAAT ATGTCTACGA TTTCTCGTTT CCTAAAGAGG CTGGTAGCCC CAACCCGCAC
CTCTGGACAC ACCCGCTGCA TGGCTTGCGC TACGCCGAAA TTGTGCGTGA TGCCTTGGTG
CGCCGCGACC CGAGCAACGC TGAGTATTAC AACGCCAATT ATGCCAGCTT CAAAACCCGC
ATCGAAGCCT TTGATCTGGC AGTTAAAAAA ACGATCGAGA GTATCCCGGC TGAAAATCGC
AAATTGCTGA CCTACCACGA TTCATGGGCT TATTTCGCCC CGCACTATGG CATGACCGTG
ATTGGGGCAA TTCAGCCTGC TGATTTTGCC GAGCCATCGG CCAAAGATGT TGCCGATTTG
ATCACGCAGA TTCGTGAGCA AAAAGTGCCA GCGATTTTTG GCTCGGAAGT TTTTCCATCG
CCAGTATTAG AGCAAATTGG CCGCGAAACA GGCGTAAAAT ATATTGATAG CCTGCGCGAC
GACGATTTAC CTGGCGAGGT CGGGGCTGCC AATCACTCAT ATTTAGGCTT GCTGACCGAA
GATCTGCGGA TTATGGCCGA AAATTTGGGT GGCGACCCCA GCTTGATTGC CAATTTCGAT
ACCAGCAATA TTCCTGGCAG CGATAGCAGC GTCGTTCAAC AACAATAG
|
|---|
| Protein sequence | MRRWWIISFL SLFILASCGA EQAAPTTQGQ TAKLNVVSTV SPITNIIYNI AGDKISLTGI
VPEGVNSHTF EPVPSDAKTL AEADLIFING LNLEEPTHKL AEANKQPSAE IILLGEQTIT
PEQYVYDFSF PKEAGSPNPH LWTHPLHGLR YAEIVRDALV RRDPSNAEYY NANYASFKTR
IEAFDLAVKK TIESIPAENR KLLTYHDSWA YFAPHYGMTV IGAIQPADFA EPSAKDVADL
ITQIREQKVP AIFGSEVFPS PVLEQIGRET GVKYIDSLRD DDLPGEVGAA NHSYLGLLTE
DLRIMAENLG GDPSLIANFD TSNIPGSDSS VVQQQ
|
|---|
| |