Gene Haur_1676 details

Gene Information

• Locus tag: Haur_1676
• Symbol: greA
• ID: 5733560
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: -
• Start bp: 1942562
• End bp: 1943029
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641278815
• Product: transcription elongation factor GreA
• Protein accession: YP_001544447
• Protein GI: 159898200
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000127836
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGATA AGCCGTTTTA TCTGACTAAA GAGGGTCGTG CGAAACTGGA AGCGGAAATT 
GAGGAACTTG AAACAACTGG CCGTATGGAA GTTGCCGAGC GGATTCGTCA AGCCAAAGAA 
CTCGGCGATA TTTCCGAAAG CGGCGAGTAC GAAGATGCCA AAAATAAGCA GGCTTTCCTC 
GAAGGGCGCA TCCGCGAAAT CCGTAACATT TTAAATAACG CCCAAATGAT TGAAGAAGAT 
GGGGATAACC GCGAGGTACG GCTAGGGTCA TCAGTCACGA TTCGCTATGA AGACGGCGAA 
GAAGAAGAAT GGATGATTGT CGGTGCTGCC GAAGCTAGCC CCCGCGATGG CAAAATCTCC 
AATGAATCGC CGATTGGCAG CGCTTTGATG GGTAAACGCG CTCGTCAAAA AGCCACTGCC 
AGCACCCCCA GCGGGATTAT GAAAATGACA GTTCTCAAAA TTCGCTAA 

 

Protein sequence

MTDKPFYLTK EGRAKLEAEI EELETTGRME VAERIRQAKE LGDISESGEY EDAKNKQAFL 
EGRIREIRNI LNNAQMIEED GDNREVRLGS SVTIRYEDGE EEEWMIVGAA EASPRDGKIS 
NESPIGSALM GKRARQKATA STPSGIMKMT VLKIR