| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1170 |
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| Symbol | |
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| ID | 5733063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1342627 |
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| End bp | 1344708 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641278310 |
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| Product | carbohydrate-binding CenC domain-containing protein |
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| Protein accession | YP_001543946 |
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| Protein GI | 159897699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000394833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGTT TGGTTCAACT TTCGCTGCTG ATGGTGTTGG GTGTCGCATG GCTCGGTTCG
ACGCGGGCAC ATACCGCAAT TCCGAATGGC ACATCGATTG TATTTGATGA AGCCTTGGCT
ACTGGTTGGC AAAATTGGTC GTGGAGCACA GCGGCAGCGT TTGATAGCAC TGCCCAAGCG
CATACCGGCA CGAAATCGAC GGCAATAACC TTTGAGGCGT GGGGCGGTTT TTCGCTACAC
TCACCTGGGC TGATTCCCGC CGAAGCCTTG ACTGGAATTA GTTTTTGGGT CTATGGCGGT
ACTGGTGGCG CACAGTTTAA TGCTGGGGTC ACGACCTCTG ATAGCGGTAA TATCGTTGCT
GCTGTGCCAG TTAACGCTCC CGCTGGCCAA TGGACGCAGG TTCAATTGAC AATGGCCCAG
TTGGGCAATC CCAGTGCAGT TTCACGGATT AACTTGCAAG AATCCACAGG TACGGCTCAA
GCAACCTTCT ACATCGACGA TCTTATCCTC AATATTGTCG ATTTTGCCCC ACCAGGCACA
GTTAATGTAA CGATCGATAC CGATCAAACC GTGCTTGACT TTAGTGCCCG CAATGCACTT
GGCACCAATT ATGGTATGTG GGGGGTTGAA GCTGCGGCCA ATTCAACTTT CTTGGCCCGC
AGTGGCGCGT TGGGTAATAT GACAATTCGT TTGCCAGGTG GCTCGATGAG CCAAGACCAT
GGGGCAATCA ACTGCGAATT GGGCACGGGC AACACAATTG CCAACGCATG GCCATGTAAT
TATGAATGGG CCATGACCCC AACCGATTTT ATTGAATTTC TGAGCGCAAC CGATCGCGAT
GCGATCTGGA CGATCAATAC CAACGTGACT TCGGGCGAAG CTGCCGCGTT GGTTGCCTTC
TTCAATGGCG ATGTCAATGA TCAACGGGCA CTTGGCACCG ATCACAAAGG TGTGAATTGG
CAGACAGTTG GCCATTGGGC GCAACTGCGG GCCAGCCATG GCAATGCCGC ACCAGTTGGC
ATCAAATATT GGGATTTTGG CAACGAAACC TATGGATCAT GTGTCCAAGG CTGGGAAGTT
GGCTGGACCT GTGATGGTGC TGAATATATC AACGGCTTGC CAGCACCCAA TCGCCACGAA
GGCTATCTCG AAGTTCGTGC AGCAATGAAA GCGGTTGACC CAACGATTAT GGTCGGTGTA
ACTGGCTTAG CCAACCCAAC CGAATTCAAC AACTGGACCA CCAAAGTGCT GACCGAGGGC
GGCGATGTGA TCGACTACCT CGCAATTCAC CCCTACTCCT TTGTTGATGT GCCAAACAAT
GATGCGCTTG GCCGTTATTT GATGCTTTCA CGCCCGCAAA AACAATGGCC TGAAGTTTTT
GCTAGCACTC GTCAAGCGAT CGCCGATTTT GCTGATGGTC GCAATATTCC GATTATGATT
GGCGAATACA ATTTGAGCGC TGGCTGGCCA TATGATCCGC AAGCGATGAT GACCAAAGCG
CTGAATATGT TGTTTATTGC TGATACAACC GGCCAAATTA TTCAAGGCGA TGTGTTGGCT
GCCAACCATT GGCTGTTGAA TGGCAATGTG CAAAGCAATG GCACCGATTA TGGTTTGATT
GGCGATGTGC CAACCTACAC TCGTAGCCCG CAGTATTATG CCTTCCATCT CTGGCAATTT
TTCGGCAATC GCCTACTTGA ATATACCAGC GATGCCGATG CCGAAACCCA AATTAGCATG
TATGCTGGCA GCGATGGCCA TACGATCTCG CTGATGGCAA TCAACAAAAC AGGCCAAGCG
ACCACCACCA ATGTCCAACT TCGCGCTGGT GGTGTGGTCA TTCCGGCAAT TTCTGGCTCG
ATTGATGTGG CCCAAGCTGT TAGCCTCGAT GCAACCACAA TCACGTATAA TGGGCAAACC
AATGTGAACG ATGATTTTAG TAATGCACAA ACGGTTGAAT TGACCGAAGT CGGCGAAACC
ACCACGGTCA CGCTGCCCGC TTACTCAATC ACGCTCTTAC GGTTTGCAAC CGATGACGGC
ATCCATACGC TGTATAATCC GTTGGTGCTG CTCAACAAAT AG
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| Protein sequence | MRRLVQLSLL MVLGVAWLGS TRAHTAIPNG TSIVFDEALA TGWQNWSWST AAAFDSTAQA
HTGTKSTAIT FEAWGGFSLH SPGLIPAEAL TGISFWVYGG TGGAQFNAGV TTSDSGNIVA
AVPVNAPAGQ WTQVQLTMAQ LGNPSAVSRI NLQESTGTAQ ATFYIDDLIL NIVDFAPPGT
VNVTIDTDQT VLDFSARNAL GTNYGMWGVE AAANSTFLAR SGALGNMTIR LPGGSMSQDH
GAINCELGTG NTIANAWPCN YEWAMTPTDF IEFLSATDRD AIWTINTNVT SGEAAALVAF
FNGDVNDQRA LGTDHKGVNW QTVGHWAQLR ASHGNAAPVG IKYWDFGNET YGSCVQGWEV
GWTCDGAEYI NGLPAPNRHE GYLEVRAAMK AVDPTIMVGV TGLANPTEFN NWTTKVLTEG
GDVIDYLAIH PYSFVDVPNN DALGRYLMLS RPQKQWPEVF ASTRQAIADF ADGRNIPIMI
GEYNLSAGWP YDPQAMMTKA LNMLFIADTT GQIIQGDVLA ANHWLLNGNV QSNGTDYGLI
GDVPTYTRSP QYYAFHLWQF FGNRLLEYTS DADAETQISM YAGSDGHTIS LMAINKTGQA
TTTNVQLRAG GVVIPAISGS IDVAQAVSLD ATTITYNGQT NVNDDFSNAQ TVELTEVGET
TTVTLPAYSI TLLRFATDDG IHTLYNPLVL LNK
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