Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0403 |
Symbol | |
ID | 5731971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 474076 |
End bp | 474663 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641277526 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001543182 |
Protein GI | 159896935 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGGAA ACGTGGTTAA AGTTGACCCG CGCACCAAGC GCACCCGTAA ATTAATTCTT GATGCTTTGA TTCAACTCTT GCGCACCCAT ACCTTCGAGG AAGTCACGGT CAATGAGATT GCCGAAGCAG CAACGATCAA TCGTGCAACC TTTTATGCCC ATTTCAGCGA TAAATATGCC TTGGTCGATG AGCTAATTCG TGATGGCTTT ATGCTGTATC TTGATCGACG CATGCAGCAT TATCCTGATA CGCCGACGCG CTATATGCAA GCTTTGCTCT GGGCGATCGC CGACCACTGG GCGATGATCC ATGGTCAATG CAATCAATAT CATCGCTTTT TCGATTCGCT GGCCGAAAAT CAGATCAAAC GCATGCTGGA GCAGCATATT CAAACTTGGC TTGATCATTA TGGGCCGCTG CGCAACGTGC CAGCCATGCA ACGCCAATTA TTAGCAACCA TGCTGAGTTG GTCGGTCTAT GCTTTGGTTG CCCGCTGGCT GTATAGCGAC CGCTGCCAAA ACCTCGAACA TTTTATCAAT GATAGCGTGC CCTTGCTGGT TGGCAGTATC GAAGCGTTGA AAGGATGA
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Protein sequence | MLGNVVKVDP RTKRTRKLIL DALIQLLRTH TFEEVTVNEI AEAATINRAT FYAHFSDKYA LVDELIRDGF MLYLDRRMQH YPDTPTRYMQ ALLWAIADHW AMIHGQCNQY HRFFDSLAEN QIKRMLEQHI QTWLDHYGPL RNVPAMQRQL LATMLSWSVY ALVARWLYSD RCQNLEHFIN DSVPLLVGSI EALKG
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