Gene Dshi_4085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4085 
Symbol 
ID5714604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp19968 
End bp20222 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content61% 
IMG OID641276992 
ProductWGR domain-containing protein 
Protein accessionYP_001542288 
Protein GI159046619 
COG category[S] Function unknown 
COG ID[COG3831] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.144172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0339375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGC TTGAGTTGTT TCCCGAGGAT ATCCGCATCG AGCGCGTAGA CCCCGAGGCC 
AATATGTATC GCTTTTATCG GCTGCGCTTG ATGCCCGACC TGTTCGGCGG CGTATCACTG
CTGCGCGAAT GGGGCCGCAT CGGCACCCAA GGGCGGCATC GGATCGAGCT GTTCGAAGAT
GCAGGCCGCG CGGCCGACGC TATGGTTTCG CTCTATCGCG CCAAGCAGAA GCGCGGATAT
CAGCTCGTCG GGTAA
 
Protein sequence
MQQLELFPED IRIERVDPEA NMYRFYRLRL MPDLFGGVSL LREWGRIGTQ GRHRIELFED 
AGRAADAMVS LYRAKQKRGY QLVG