Gene Dshi_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3688 
Symbol 
ID5714218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp92394 
End bp92966 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content55% 
IMG OID641276606 
ProductBioY protein 
Protein accessionYP_001541902 
Protein GI159046230 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.983357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACTG GAATTGGTCA ACGTTGTCCT GTTCGTGCTG GACGTAAGGG GGCGCTGATC 
TTGGTAGGCG TGGCCGTAAT ACTGCTTAGT ATCTCGTCCT ACATAGAAAT TCCGATGGTT
CCGGTCCCCA TAACGGCTCA AACCTTTATG GTGCTGACTG TTGGAGCGGT TTTAGGGCCG
CTTCTCGGCA CTATTGGGAC AGTCATATGG CTGCTCTGCG GCGCAGTCGG TTTGCCTGTG
CTAGCTGGTG GCGCAAGCGG CCTCGGCCAT TTTATGGGGC CGACCGCCGG ATTTCTCTTC
GCGTTTCCAA TTGCCGCCCT CACTGCAGGT GTACTGGTTT CAAAACGGCA GGGCGCAGGA
GTTGCTTATC GGGCATGGTG GGTGTTCTTG GCTGGCATCG CAGGGCACAT CATTTGCCTT
GGGCTTGGCG TACTCTGGTT GAGCACTTTG ATCGGCATAG GCGCAGCTCT GGAAAATGGT
TTTTTTCCGT TCATCTTGGG GGGCATCCTT AAGTCGACCG CTGTTGCCGC CGTAGTGATA
GGGATTGAAC TCCAGAGTGG AAAGACATCG TGA
 
Protein sequence
MGTGIGQRCP VRAGRKGALI LVGVAVILLS ISSYIEIPMV PVPITAQTFM VLTVGAVLGP 
LLGTIGTVIW LLCGAVGLPV LAGGASGLGH FMGPTAGFLF AFPIAALTAG VLVSKRQGAG
VAYRAWWVFL AGIAGHIICL GLGVLWLSTL IGIGAALENG FFPFILGGIL KSTAVAAVVI
GIELQSGKTS