Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_2002 |
Symbol | rps2P |
ID | 5708589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 2076776 |
End bp | 2077423 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641276511 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001541807 |
Protein GI | 159042555 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01012] ribosomal protein Sa(cytosolic)/S2(archaeal) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATG AAACTAAGCA ACCTGAGCAG GGGGAGGAGT ATTTAGTGCC TGTGGAGAGG TATATGGCTG CTGCGGTTAG GCTTGGGGCC AGGGTCTCTA ATAATTACCT GCAGGAGAGG GGCTTCATCT TCAGTGTTAG GCCTGATGGG TTGAGGATAT TTAACTTGAA GAGGATTGAT GAGAGGATTA GGATTGCTGC AAGGATGATT ACGAGGTATC CACCATCCAG GGTCATGGTT CACTCCACTA AGCCATACGC CTTCAAGCCC ATTCAAATGT TCTGTAAATT CGTGGGTTGC CTACCAGTCA CAGGTAGGTT AATCCCAGGT ACATTAACAA ACCCCTACTT AACCCACCAC ATTGACATTG ACCTACTCAT GGTCGCTGAC CCAAAGACGG ACTTCCAGGC GATTAACGAG GCGTCATTAA CCGGAATACC CGTAATAGCC CTAGTGGACA CTGATAGTGA CCCAACGTTC ATTGACTTAA TGATACCCTG CAATAATAAG GGTAGGAATA GCCTAGCCCT AGTCTTCTGG TTACTGGCTA GGCAGGTACT TAGGGAGAGG GGTGAGTTGA AGCCTAATGA GGATTTACCG GTTAGTTGGG AGGAGTTCAG GGTACCTGTT GGTCAATCCA GGTCATAG
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Protein sequence | MSNETKQPEQ GEEYLVPVER YMAAAVRLGA RVSNNYLQER GFIFSVRPDG LRIFNLKRID ERIRIAARMI TRYPPSRVMV HSTKPYAFKP IQMFCKFVGC LPVTGRLIPG TLTNPYLTHH IDIDLLMVAD PKTDFQAINE ASLTGIPVIA LVDTDSDPTF IDLMIPCNNK GRNSLALVFW LLARQVLRER GELKPNEDLP VSWEEFRVPV GQSRS
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