| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1193 |
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| Symbol | |
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| ID | 5710175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1253909 |
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| End bp | 1254997 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275695 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001541010 |
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| Protein GI | 159041758 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0917874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000705466 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATGATT TAATAATTAT TGGTAGTGGA CCCGCAGGTA ATGCCGCTGC ATTAGTTGCT
TCAAGGCTGG GTGTTAGGGC ATTGATTATT GATAAGTCCA AGCACCCCAG GGTTAAGCCG
TGTGGTGGTG GATTAACACC TAAGACGATT GCGTTATCAA GGATACTTGG ATTAGACTTG
AGCGAGGTTA TTGAGCATGA ATGCGGTGAA GTATTAGTGG TGACGCATGC TGGTTCATTC
GTAATGAGGT TTAAGGAGCC TATGATAAGG GTCTCCAGGA GGGAGAGGTT GGATGAATTC
ATGTTTAATG AAGCCGTTAA TAATGGTGTT GAGTACGTTA ATGACGAGGT GCTTAGGGTT
AGGGAAACGC CGAGTAAGGT TGAGGTAATA GGTAGGAGTA GTGTGTATGA GGCTAAGTGG
GTTATTGGGG CTGATGGGGC GCCATCAAGG GTAGGTAGGT CAATTGGGGT AATGCCTAGG
TCAAATGCAG TGGCATTAAT GAACATAGCC TCAGGTAACC CAATCATTAA CACTGGGGAT
GCCTGCATAC TTGACTTCAC TAGGATTAAG TGGGGTTACG CATGGTTATT CCCACTGAGC
CACGGTGAAT ACGATGTTGG ATTAGGCTCA GCTTTAAAGG GTAGGTACAG TAACTTACTG
TTAAGCTACG TTAATGAACT CGGCTTGAAA CCAGGCAGAT TAATAGGCCA CCTAATACCC
TACAGGCCAC CTAACTCAGC CTCAACCCGT AGAGTAATGT TAACTGGGGA TGCCTTAGGT
TTAGCTGACC CAGTTACCGG GGAGGGTATT TTCCAAGCAA TGATGAGTGG TGCGTTGGCT
GCCTTATCAT TAAGGAGCAG TAATGCCACC GAGTACTATG ATTCAATAAT AACCAGTTAC
CTTAGGGATA ATCAATACGC ATTAACGGTA GCCTACGTTG TTTACGGTCT TGATTCACAG
TTCCTAAGCC GATTCCTAAA GATAACAGGC TTCAGTGAAC CTGGTGCAGT CCGCATTATT
GAGAAGGTTA CTGGGGGTAA GTTAACGTAT AGGGATGCTG TTAAGGAGGT TATTAAATCC
ATGATATAG
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| Protein sequence | MYDLIIIGSG PAGNAAALVA SRLGVRALII DKSKHPRVKP CGGGLTPKTI ALSRILGLDL
SEVIEHECGE VLVVTHAGSF VMRFKEPMIR VSRRERLDEF MFNEAVNNGV EYVNDEVLRV
RETPSKVEVI GRSSVYEAKW VIGADGAPSR VGRSIGVMPR SNAVALMNIA SGNPIINTGD
ACILDFTRIK WGYAWLFPLS HGEYDVGLGS ALKGRYSNLL LSYVNELGLK PGRLIGHLIP
YRPPNSASTR RVMLTGDALG LADPVTGEGI FQAMMSGALA ALSLRSSNAT EYYDSIITSY
LRDNQYALTV AYVVYGLDSQ FLSRFLKITG FSEPGAVRII EKVTGGKLTY RDAVKEVIKS
MI
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