Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0945 |
Symbol | |
ID | 5708663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 991528 |
End bp | 992784 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275446 |
Product | threonine dehydratase |
Protein accession | YP_001540767 |
Protein GI | 159041515 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATTCTATCTG GTGAATTATA TATCACAAGG GTTAATGAGG TCTACGAACT CAGTAGGGAG GCTTTAACCC TCATTAAGGA TGCTCAAGCC AAGGGTATAA TACATAGAAC ACCCCTCTAT AGATCCGATA CATTAAGTTC ATTAACCAAT GCCGATGTTT ACCTTAAACT TGAGGCACTT CAAAAAACTG GGTCATTCAA GGTTAGAGGC GCCTACAACG CTGTAACACA CTATATTAAT GATGACGTTA AGCATGTTGT CACTGCATCA GCTGGTAATC ATGCTCAAGG CGTTGCATAC GTCGCTAAGA TATATGGCTT GAAGTCTACG ATAGTGATGC CTAAGTACAC GCCGTGGATT AAAATAAGCA ATACCAGGAA GTATGGTGCA GAAGTCATAC TTGAGGGTCA ATCTTACTAT GAGGCTGAGA AGTATGCTAT AGAGTTAACT AAGGAGCTTA AGGCAAAAAT GATCCATGCA TATGATGATC CATTCGTTAT TGCTGGACAG GGAACAATAG GGTGGGAAAT TATTGAGGAT CTTAAGAATA TTGACTACGT AATAGTCCCA GTGGGCGGTG GGGGATTAAT ATCAGGTATC GCCTCAGTTA TTAAGACTAT TAGCCCAAAC ACTAGGGTGA TTGGGGTGCA GAGCGAGATA ACTCCCTCAG CATACTTATC CCTTAAGCAA GGTAAGATCA TTACGGTAGA GAACACGGAC ACTATCGCTG ATGGTATAGC TGTTAAGAAG ATTGGGGACT TAACCTTCGA TATAATGCGG AATACGCTTG ATGATGTGGT TTTAGTCAGT GACCAGGAAA TAGTTAACGC CATACTAATA TTGGCCGAGT CAGCCAAGGT TATAGCTGAG GGGGCTGGAG CAGCTGCTGT AGCTGCGTTA CTGAGCGGTA AAATTAACGT TAAGGGTAAT GTGGTGGCTG TTGTTAGTGG AGGTAATATT GATGTCACGA TGCTTGCCAA GGTCCTTTAC AAGGGACTTG TTCAAACAGG GAGATTAATT ATGCTTAAGG GACTTATACC AGATAGGCCA GGTATGCTTG CCCAGGTAAC TGGTGTTCTA GGTAGGCTGG GGGTTAATAT TGTTGAAATT AGGCATGAGA GGTATAACCC ATTAATAAGA CCCAATTACA CTGAGGTAGA TGTAATAGTT GAAACACCAC CTGAGGAGGG AGCTGTAGAT AGGGTTATTG AGGAATTAAG TAGATTAGGC TTCAACTTTA AGGTTGAAGT GCCTTAA
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Protein sequence | MLSGELYITR VNEVYELSRE ALTLIKDAQA KGIIHRTPLY RSDTLSSLTN ADVYLKLEAL QKTGSFKVRG AYNAVTHYIN DDVKHVVTAS AGNHAQGVAY VAKIYGLKST IVMPKYTPWI KISNTRKYGA EVILEGQSYY EAEKYAIELT KELKAKMIHA YDDPFVIAGQ GTIGWEIIED LKNIDYVIVP VGGGGLISGI ASVIKTISPN TRVIGVQSEI TPSAYLSLKQ GKIITVENTD TIADGIAVKK IGDLTFDIMR NTLDDVVLVS DQEIVNAILI LAESAKVIAE GAGAAAVAAL LSGKINVKGN VVAVVSGGNI DVTMLAKVLY KGLVQTGRLI MLKGLIPDRP GMLAQVTGVL GRLGVNIVEI RHERYNPLIR PNYTEVDVIV ETPPEEGAVD RVIEELSRLG FNFKVEVP
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