Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4948 |
Symbol | |
ID | 5706498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5616368 |
End bp | 5617129 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641274343 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001539685 |
Protein GI | 159040432 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.623441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGGTC CTCCCCTGGC CGTCGTGACC GGCGCCTCGT CCGGTATCGG CGCGGAATTC ACCCAGCGGC TTCTTGACCG CGGATATCGG GTGCTCGCCG TAGCCCGGCG AGCTGACCGG CTGGTCGCGC TGGAGGAGTC CACCGGTGGC CGGGTCATCG CGGAGCCGTG CGACCTCACC GTCGACGGCG CGACCGACGC GGTGGCCAAG CGTGCCGAGG AACTCGGCGG CGCTGACCTG CTCGTCTGCA ACGCTGGCCG CGGTCTGCAC GGCCGGTTCG TCGACACCGA GCGGTGCGAC ACTCTCGCCA TGCTGCAGCT GAACGTGCTG TCGAGTGTGG ATCTGGCTGC ACGGATCGTG CCGACGATGG TGCGACGTGG ATCCGGCGGC GTGATCGTCG TCGCGTCGAC GCTGGGCTTC GTCTCGGTGC CCAACCTGGC GGCCTACGGA GCCAGCAAGG CCTTCCTGCT GTCGTTCGCC GAGGCGCTGT CCACCGAACT CAAGGGCACC GGCGTCAGGG CGATGGCCTT GTGTCCCGGG CCGACCATTT CCGAGTTCAG TGAGGTGGCC GGGCTCGACG GCCAGGTCGA GAAGACTCCC GGACACACCA CCACCGCCGA GGTGGTGAGC GGAGCTCTGC GGGCGTGGGA TGCCGGGCGC GTGACAACTG TGCCCGGCAC GATCACCCGG CTGATGACCG GGGCCCTGGC CTACGCTCCC CGCTCGGTCG GACGGATGGT GATGGAGCGC GTGTTCCGCT GA
|
Protein sequence | MSGPPLAVVT GASSGIGAEF TQRLLDRGYR VLAVARRADR LVALEESTGG RVIAEPCDLT VDGATDAVAK RAEELGGADL LVCNAGRGLH GRFVDTERCD TLAMLQLNVL SSVDLAARIV PTMVRRGSGG VIVVASTLGF VSVPNLAAYG ASKAFLLSFA EALSTELKGT GVRAMALCPG PTISEFSEVA GLDGQVEKTP GHTTTAEVVS GALRAWDAGR VTTVPGTITR LMTGALAYAP RSVGRMVMER VFR
|
| |