Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4810 |
Symbol | |
ID | 5708146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5440742 |
End bp | 5441566 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641274206 |
Product | transcription activator effector binding |
Protein accession | YP_001539551 |
Protein GI | 159040298 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0789] Predicted transcriptional regulators [COG4978] Transcriptional regulator, effector-binding domain/component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.858088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACC TGATCCCGAT CGGGCGTTTC TCCCGGATGA GCCGGCTGTC AGTCAAGGCC CTGCGCTTCT ACAATGAGCA GGGCCTGCTC GCACCCGCTT GGGTCGACCC GTCCTCGGGC TACCGCTACT ACCGGCGGGC CCAGGCCGAG CGGGCCGAGG CGATCCGGGT ACTACGCGCG ATCGACATGC CGATCGCGGA TATCCGCGAC CTACTCGCCG ACGACGACCC GGAACTGACC GGCAAACGCC TCGTCGCGCA CCGGGAGCGG TTGCGGGCCC GGCTCGCCGA GCAGGAGCGG ATGCTGCGGT TCCTCGAAGT ACTCATCGAT CGGGGAGGAC GTGTCATGCC GTACGACGTC ATCGTGAAGG AAGCCGCCAC TATTCCGGTG GCCAGCCTCA CCCTGCACAC CAGCCTCGAT GCGATCGGCG CCGACATGGG CCGCGGCTTC GGCACGGTCG TCGACGCCAT CGGCAACGCC GGCGCCGAGT CCAACGGAAA GCCGTTCGTC ATCTACCACG ACGTCATCGA CGAACAGAAC AACGGTGACA TCGAGATCTG CATCCCGGTC CCGGCCGGCA CCGTCCTGCC CGGCGACCCG GTCCGCTACC GTGAGCTCCC CGGCGGCCGG GTCGCCACCA CCGTCCACCG AGGGCCGTAC CAGGAGATCA GCCCCGCCTA CCACGTCGTC ACCGGCTGGA TCGAGCAGGA GGGTATGCAT CCGGCGGGCC CGCCGCGCGA GGTCTACCTC AACGACCCTC AAACGGTCAG TCCCGCTGAG CTGCTCACCG AGGTGCAGTT TCCCATCGAC AGGGCGCCGC GCTGA
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Protein sequence | MDDLIPIGRF SRMSRLSVKA LRFYNEQGLL APAWVDPSSG YRYYRRAQAE RAEAIRVLRA IDMPIADIRD LLADDDPELT GKRLVAHRER LRARLAEQER MLRFLEVLID RGGRVMPYDV IVKEAATIPV ASLTLHTSLD AIGADMGRGF GTVVDAIGNA GAESNGKPFV IYHDVIDEQN NGDIEICIPV PAGTVLPGDP VRYRELPGGR VATTVHRGPY QEISPAYHVV TGWIEQEGMH PAGPPREVYL NDPQTVSPAE LLTEVQFPID RAPR
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