Gene Sare_4542 details

Gene Information

• Locus tag: Sare_4542
• ID: 5705983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora arenicola CNS-205
• Kingdom: Bacteria
• Replicon accession: NC_009953
• Strand: +
• Start bp: 5135735
• End bp: 5136505
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641273956
• Product: abortive infection protein
• Protein accession: YP_001539305
• Protein GI: 159040052

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.651629
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0215821
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCCTCG ATCTGGACCG TCCGGTGTCC CACCGCACCC TGAGCACCGA GACGTTGCTG 
GTCCTCGGCC TCTCACTCGG CCAGTCGGCC GTCTACGCCC TGGTGTCGAT CGTCGCCAAA 
CTCACCGCCG ACGGGCCGCT GTCGGCACAG ACCGCCGCAC TGAACACGTC CCGGTCCGCG 
CGGCCCTACC TCGACCTCAC CTACCAGCTA CTCGGTATCG CGTTCGCCCT GCTACCAGTG 
CTGCTCGCCA TACACCTGCT GGCACGGAAC CCCGGCGACC CGGCCCGAAC GCTCGGTCTG 
GACGCCCGGC GGCCCGGCCA GGATCTCGCC CGAGGTGCCG GCCTGGCAGC GCTGATCGGC 
CTGCCCGGCC TGGCCCTGTT CTGGGCGGCG GCGCAGCTCG GCGTCAACGC GACGCTGGTG 
CCCGCGGCGC TGCCCGACAT CTGGTGGGCG GCGCCGGTAC TGATCCTCGC TGCCGTGCAG 
AACGCCGTGT TGGAAGAGGT GATCGTGGTC GGCTACCTGG TCACCCGACT GCGGCAGCTT 
CAGTGGCGAC TCGGTGCGGT CGTCGCCACC AGCGCGCTGC TCCGCGGCTC TTACCACCTC 
TACCAGGGCT TCGGCGCGTT CGTCGGGAAC GCGGTGATGG GTGTCATCTT CAGCCTGTAC 
TACCTACGGA CCCGACGCGT GATGCCACTG GTGGTGGCGC ACACGCTACT GGACGTGGTG 
GCCTTCATCG GCTACACCGT GCTACCCAAG GAATGGTTCG ACTGGCTCTG A 

 

Protein sequence

MTLDLDRPVS HRTLSTETLL VLGLSLGQSA VYALVSIVAK LTADGPLSAQ TAALNTSRSA 
RPYLDLTYQL LGIAFALLPV LLAIHLLARN PGDPARTLGL DARRPGQDLA RGAGLAALIG 
LPGLALFWAA AQLGVNATLV PAALPDIWWA APVLILAAVQ NAVLEEVIVV GYLVTRLRQL 
QWRLGAVVAT SALLRGSYHL YQGFGAFVGN AVMGVIFSLY YLRTRRVMPL VVAHTLLDVV 
AFIGYTVLPK EWFDWL