Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4461 |
Symbol | |
ID | 5704952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5042504 |
End bp | 5043241 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273877 |
Product | NADH dehydrogenase subunit C |
Protein accession | YP_001539226 |
Protein GI | 159039973 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAC CCCAGGACAG GACGGACGAC GGTGGCGTGC CGGTACCGGT GACCCCCGCC GGGGCCACCG GCGGCGCACC GGCCGAGCTG CCGCCGTCGA GCCCCGCTGG GCGGGGGATG TTCGGTGACC AGGGCACCGG CGACGTCTCC GGCTACGGCG GCCTGGTCCG TCCGCAACGG TCGATCGAGG CGGCCTCGCG GCCGTACGGT GGCTACTTCG ACGAGGTGGC CGACGCGTTG GAGGAGGCGT ACCCGGCCTT CGGTGAGGCG ATCGAGAAGG TCGTGGTCGA CCGGGGCGAG CTGACCCTGC ACATCCGCCC GGAGCGGATC GCCGAGGTCT GCCAGGTGCT GCGCGACGAC CTCGCGCTGC GGTTCGAGCT GTGCTCGTCG GTCTCCGGGG TGGACTACCT CGGCGCCGAC GCCCGCCGAC TGCATGCGGT CTACCAGCTG ACCTCGATGA CCTACCGGCG TCAGATCCGG CTGGAGGCGG CGGTCTCCGT CGAGGATCCG CATCTGCCGA GCGTGACCGG CGTCTACCCG ACTGCCGACT GGCAGGAGCG GGAAGCGTAC GACATGTTCG GCATCGTTTT CGACGGCCAC CCCGGCCTGA CCCGGATTCT CATGCCGGAC GACTGGGAGG GTCACCCGCA GCGCAAGGAC TATCCGCTCG GCGGCGTGCC CGTCGAGTAC AAGGGTGCCG AGATTCCGCC GCCGGATCGC CGGAGGTCGT ACCAGTGA
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Protein sequence | MNAPQDRTDD GGVPVPVTPA GATGGAPAEL PPSSPAGRGM FGDQGTGDVS GYGGLVRPQR SIEAASRPYG GYFDEVADAL EEAYPAFGEA IEKVVVDRGE LTLHIRPERI AEVCQVLRDD LALRFELCSS VSGVDYLGAD ARRLHAVYQL TSMTYRRQIR LEAAVSVEDP HLPSVTGVYP TADWQEREAY DMFGIVFDGH PGLTRILMPD DWEGHPQRKD YPLGGVPVEY KGAEIPPPDR RRSYQ
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