| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3190 |
|---|
| Symbol | |
|---|
| ID | 5705625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 3680783 |
|---|
| End bp | 3681757 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641272621 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001537988 |
|---|
| Protein GI | 159038735 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4188] Predicted dienelactone hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00525581 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC CACACCGGCC GGCCGACACG GTCGGCGCCC CGACACCCGT CCTGTCGGTC
AGTCCAGTGG TGCTGCAGGC TCCTGGCCGT GCCGTGGACC TGCAGGTACG GGTCTCCGCT
CCCATGACCG GAGGCGAGCT ACCGATCATC CTCCTCTCAC ACGGGCACGG CCCCTCGAAC
CACCTGTCCT CCCTGAACGG CTACGCCCCA CTCGCGAACT ACTGGGCGGC ACACGGCTTC
GTCGTGATCC AGCCCACCCA CCTGAACTCG AGAACGCTGA ACCTGGACCC GGATGATCCC
GAGGCCCCCC TGTACTGGCG ATCGCGGGGC GAGGACATGA AACGCATCCT CGACCAGCTC
GACCAGATCG AGGCCGCGAT CGGGCAGCTC CAGGGCCGCC TGGACCGGAG CAGGGTCGCC
GTGGCCGGGC ATTCGATGGG TGGACACACC GCGAGCCTGC TGCTGGGCGC CCGGCTGACC
GACCCGCACG ACGGGACGGA GGTGGACCTC TCCGAGCCCC GGATCACGGC AGGTGTGCTG
CTCGCCGCAC CCGGCAGGGG AGGCGACGCC CTCACCGACT TCGTGGTCGA CAACTACCCC
TTCTTCTCGA CCACCGACTT CTCCACGATG ACGACACCCA CCCTCGTGGT CGCCGGCGAC
CGGGACACCT CTGCCCACCT GACGGTGCGA GGACCGCGAT GGCACACCGA CCCTTATTTC
CTCTCCCCCG GCCCCAAGTC CCTACTCACC CTGTTCGGTG CGGAACACGG GCTCGGTGGT
GTCGCGGGCT ACGACGTGGC CGAAACCACG GACGAGAACC CCGAGCGGGT GGCCGCCGTC
CAGCGGCTCA CCTGGGCCTA CCTGCGCACT ACCCTCTACC CCGGGGACTC CGCCTGGCAG
CGGGAACGGG ACGAACTGAC CAGCCGGCCC GATCCGATCG GCCGGGTCGA GTCCAAGTCG
GCGCCCGCAC GGTAG
|
|---|
| Protein sequence | MSEPHRPADT VGAPTPVLSV SPVVLQAPGR AVDLQVRVSA PMTGGELPII LLSHGHGPSN
HLSSLNGYAP LANYWAAHGF VVIQPTHLNS RTLNLDPDDP EAPLYWRSRG EDMKRILDQL
DQIEAAIGQL QGRLDRSRVA VAGHSMGGHT ASLLLGARLT DPHDGTEVDL SEPRITAGVL
LAAPGRGGDA LTDFVVDNYP FFSTTDFSTM TTPTLVVAGD RDTSAHLTVR GPRWHTDPYF
LSPGPKSLLT LFGAEHGLGG VAGYDVAETT DENPERVAAV QRLTWAYLRT TLYPGDSAWQ
RERDELTSRP DPIGRVESKS APAR
|
|---|
| |