| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3176 |
|---|
| Symbol | |
|---|
| ID | 5705851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 3660682 |
|---|
| End bp | 3661464 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641272607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001537974 |
|---|
| Protein GI | 159038721 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.441176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000145856 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGACT GGAGCCACCT GGTACCCGGC TGGGTCCTGT TCCTCATCTT CCTGATGTTC
TTTGTCGGCA TAGCGGCGTT GGGGGTACGG CTGCTGCACG GACGAGCCAA ACGGGTGTGC
GGCGCCGAGC CGAAGTGGCT GGACCTCATC ACCCACACCA TCATGATCGC CGGCACCTTC
TACGCACTTC TACTCGCCCT GACCGCGTTC TCCGTGTACG GGACCTACAA CCAGGCCAGT
CTTTCGGTCG CCACCGAGGC GGCGGACCTG AGCGCGCTCT ATCGCACGGT GTCCGAGCAT
CCGGAGCCCG CCCGTACTCA GCTTCAGGGC CTGTTACGTG AACATGTCGA ATTCATGGTC
AACGAGGCGT GGCCCGCCTA CCAGCAGGGA AACAGTGCGG ACGGCGAACT GGAGGCAGAG
AACAGGGTTC ACCGGGTGTT GCTGAAGTTC AATCCGAAGT CAGAAAAGGA AGGGCAGCTG
AACAGCCTGG CCCTGTCAGA ACTCGAGAAG TGGAGCGAGG CACGCCAGCT CCGATACACC
TACACCACGG CCGCGCTTCC CACGACGCTG TGGTTCACAC TCCTGTTCGG CGCACTGGTC
GTCATCCTGC TGTCCTGCTT CATCCCGACC CAGACACGTC GCACGTCCAT GATTCTCGTC
TGCGCCGTCG CCACCATGAT CAGTCTCCTG CTGTTCGTGG TCGAGGGTGT GGACGAACCC
TTCAGAGGAG CGATCGTCGT ATCGGTTGAT CCCTATGTCA AGGCAGGGCA GGCATTCGAC
TGA
|
|---|
| Protein sequence | MRDWSHLVPG WVLFLIFLMF FVGIAALGVR LLHGRAKRVC GAEPKWLDLI THTIMIAGTF
YALLLALTAF SVYGTYNQAS LSVATEAADL SALYRTVSEH PEPARTQLQG LLREHVEFMV
NEAWPAYQQG NSADGELEAE NRVHRVLLKF NPKSEKEGQL NSLALSELEK WSEARQLRYT
YTTAALPTTL WFTLLFGALV VILLSCFIPT QTRRTSMILV CAVATMISLL LFVVEGVDEP
FRGAIVVSVD PYVKAGQAFD
|
|---|
| |