| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1939 |
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| Symbol | |
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| ID | 5705758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2234998 |
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| End bp | 2237100 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641271444 |
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| Product | NERD domain-containing protein |
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| Protein accession | YP_001536815 |
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| Protein GI | 159037562 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00843241 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGCTG GTGGGTCCGC ATCCGCGCAA GCCGCCCGGC ACCGTGAGCA CGCGCAGTTC
CTTACCCGTC AGCTTCGTGA AGCGCATCGG GCCGCCGCTC GGTGGAGCGC AGCGGCGGCC
GGGGAACGGC AGGTCGCAGC TGCGTTGTGG GCGCTGACCG GTTCGGGCTG GACGCTTTTG
GTTGATCGGC GGTGGCCCGG TACCGCGACG GCAAACGTCG ACATGATTCT CGTCGGTCCT
GCCGGCGTGT ACGTCATCGA CGTCAAGAAC TGGCGCGACG CCCCGCAGAT TGTCGACGGC
GAACTCATCG CCGCGAACCG CTCGTGTACC TCCGAGGCGG TGAAGCTGCA AGCGGTGACG
CGCCGCGTTG AGGACGCCCT GGCCGACATG CAGATGTCAC CCGTGGCCGT CGCACCGGTC
ATGGTCTTCG TCGGGCGGCA GGTCGATGAA CGGCTCGGCC GTGTCCACCT CGTCGGCATC
CACGAACTGC TGCACACCGT CACCAGCGCC CGAACTCGCC TGCGACCTCC GGTGGTCCGC
GCGGTGGCGG CTCACCTGAC CGATGTATTT CCGGCCTACG AGGCACCCCA GCTACCCGAC
ACCGCCACGA CCGACGCCCC GGCGAGCACT CGGGACGAGC CTGGCGAGCT CTTCGATGTG
GACGACCTCG CTGCCGAACA GCTACGCGCT GCGCGGGAGC GGCCGGTCGA GAGTTGGATG
ACGTTCCTGC ACCCCGACCA GCTCAGCCTG GTGCGTCGCC GGTGGGGCGG CCCGGCGCGG
ATCACCGGCG CCGCCGGCAC CGGCAAGACA GTCGTCGGGC TTCACCGGGC CGCCTACCTG
GCCCAGTCCG GCGGGCGAGT GCTGTACGTC ACCTTCGTCC GCAACCTGCC GCTGATACAG
AAACACCTAC TCGAACGGAT GGCGCCCGCT GGCAGCGACC GGATCGAGTT CACCAGCCTG
CACCGATGGG CAGTCACCCT CCTGGCACAA CGGGGAATTC CGTCCCGCCT CAACGTCGCC
AAAGCCGATG ACTGCTTCGC CCGCGCCTGG CGCACCCACG GCCGACACAC CTGCCTCGCC
GACCTCGAGC CCAGCCCCCG CTACTGGGAA GACGAGCTCC GCCACGTCAT CAAAGGCCGC
GACATCTCCA GCCTGCCCAA ATACCTCGCC GCATCGCGAC CGGGCCGACG AACCGCCCTC
CGCAAGGCAC ACAAGGAAGC AGTATGGGCG CTGTACGAGG AATACCAGCG GCTACTGAAC
GAACGCGGCG TCCAGGACTT CCCCGACCTG CTGCTCACCG CCCTCGCGGA ACTGCGTCGC
CACCCCACCG ACGGCGGATA CACCACGGTC ATCGCCGACG AGGTGCAGGA CCTCACCCTC
ACCGGGGTCC GGATCCTGCA CGCCATCGCC GGCGACAGCC CTAACGGTCT GCTGCTCATC
GGCGACGCCC AACAAGCGGT CTACCCCGGC GGCTTCCGCC TCGCCGACGC CGGCATCAAC
ATCCGAGGCG GCCGCGCCGA GGTCCTCCAC GTCAACTACC GCAACGCGGC CGCCATCATG
CAGGCCGCAC TGAACGTTCT CGACGGTGAA CCGTTCGACG ACATCGACGG CATGACGATC
ACCGCCCCAC CGGCCGTCGA GATGACCTAC CACGACGGCC GAGTCGTTCA CTCGCCCGCA
GATTCCCGCC CCATGCACGA CGCAGCGCTC CGCAAGGCAC TGAACGATCT CGCTGCGCAG
TCCGACAACG CGTTGGCTGA CGCGGCCGTG CTGTGCGCCA CCAAACGCGA CGTCGACCAC
TATCTCCAGA TGCTCAGAGC TCAAGGGCTA CCGGTGCTGA ACCTCGATGA CTACGACGGC
CGCCCAGGCC AGGCACTGAA AGTCGGCACA TACCTACGAG CCAAGGGCCT TGAGTTCAAG
AACGTATACC TACCCTGCCA TGATCGAGGG CTCAAAGCCG CGCAACTGGG CGGATCCGCC
GATGTGGACC GGCTCGCTCT TGCCCGCCGG CAACTATTCG TCGCGATGAC CCGCGCACGG
GACCTGCTGT GGCTCGGCTC GATCACCGAC GGCGCTCCCG CCACATCGAT GAACGGGTGC
TGA
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| Protein sequence | MAAGGSASAQ AARHREHAQF LTRQLREAHR AAARWSAAAA GERQVAAALW ALTGSGWTLL
VDRRWPGTAT ANVDMILVGP AGVYVIDVKN WRDAPQIVDG ELIAANRSCT SEAVKLQAVT
RRVEDALADM QMSPVAVAPV MVFVGRQVDE RLGRVHLVGI HELLHTVTSA RTRLRPPVVR
AVAAHLTDVF PAYEAPQLPD TATTDAPAST RDEPGELFDV DDLAAEQLRA ARERPVESWM
TFLHPDQLSL VRRRWGGPAR ITGAAGTGKT VVGLHRAAYL AQSGGRVLYV TFVRNLPLIQ
KHLLERMAPA GSDRIEFTSL HRWAVTLLAQ RGIPSRLNVA KADDCFARAW RTHGRHTCLA
DLEPSPRYWE DELRHVIKGR DISSLPKYLA ASRPGRRTAL RKAHKEAVWA LYEEYQRLLN
ERGVQDFPDL LLTALAELRR HPTDGGYTTV IADEVQDLTL TGVRILHAIA GDSPNGLLLI
GDAQQAVYPG GFRLADAGIN IRGGRAEVLH VNYRNAAAIM QAALNVLDGE PFDDIDGMTI
TAPPAVEMTY HDGRVVHSPA DSRPMHDAAL RKALNDLAAQ SDNALADAAV LCATKRDVDH
YLQMLRAQGL PVLNLDDYDG RPGQALKVGT YLRAKGLEFK NVYLPCHDRG LKAAQLGGSA
DVDRLALARR QLFVAMTRAR DLLWLGSITD GAPATSMNGC
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