| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0486 |
|---|
| Symbol | |
|---|
| ID | 5704833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 555708 |
|---|
| End bp | 556961 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641270012 |
|---|
| Product | Orn/DAP/Arg decarboxylase 2 |
|---|
| Protein accession | YP_001535406 |
|---|
| Protein GI | 159036153 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.252649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.657753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC ACGCCGCGCT GGCCGAGGAG TACGGCACCC CGCTGTTCGT CTACGAGGCC
GACACCGTCG CCGCGCAGTA CACCGGCCTG CGGCAGCGGC TGCACCCGGC GATGGACATC
TTCTACTCGC TCAAGGCGAA CCCGAACCTG GCGCTCTGCG GCCACCTGCG CTCGCTCGGT
GCCGGCGCCG AGGTGTCGTC GCTGCTCGAA CTGACCACCG CCCGCGAGGC CGGCGTGCCG
CCGGGTGACA TCGTCTTCCC CGGTCCCGGC AAGAGCCGGG AGGAGATTAC CGCCTGCCTG
GACGCGCAGA TCTACGCGAT CATCTGCGAG TCGTTCGAGG AGCTGGAGCT GGTCAATGAT
CTGGCCCGGG AACGCGGCGT CCGGGCCCGG GTCGCGCTCC GAGTCAACCC GGCCTTCGCC
GTCAAGGGCT CCGGCCTGAC CATGGGCGGC AAGCCCCGGC AGTTCGGCAT CGACGAGGCG
CACCTGTTCG CCCTGCCCGG TCTGCGCCTC GCCCACCTGA GAGTGGTCGG TGTGCACGTC
TACCTGGGCA CCCGGATCCT CGACGAGACG GTGATCGCCG AGAACACCCG ACGCATCCTG
GAGCTCGCCG AGCGCCTCGC GGCGCACCTG GACTTCCCGC TGGAGTTCGT CGACGTCGGC
GGTGGGCTCG GCGTGGCCTA CTTCGACGGC GAGCGCGACC TGGCCGTGGA GCGCCTCACC
GACCTGGTCA ACCCGGTGGT CGCCGACTTC CACGACCGGC ACCGCGACAC CCGGCTGATC
ATGGAGTTGG GCCGGTACCT CGTCGCTCCG GCCGGCACCT ATCTGATCCG GGTGCGGTAC
GTGAAGAGCT CGATGGGTGA GCGCTTCGCG GTCACCGACG GCGGTACCCA CCAGCACATG
GCGGCGGTCG GCATCGGCTC CTTCGTCAAG CGTGACTTCC CGCTGCGCCT GCTCGGCCGG
CCCACCGATG GACCGCTCGT CCGGTGGACG GTCACCGGGC CGCTGTGCAC CCCGAACGAC
ACCCTGGTCC GGGCCGCCGA GCTACCCGAC CTGCGCCGGG GCGACCTGCT CGGCGTGCTC
CGCTCCGGCG CGTACGGCCC GAGCGCCTCG CCGACGCTGT TCCTCGGACA CGGCCACCCC
GCCGAGGTCC TGGTGCGCAA CGGCGTCGGG TGCCTGGTCC GGCACCGCGA CCAGGTGGCG
GACCTGCTCC GCCAGCAGAG AAGCCTCGTC ACCACGGGAG GAGACCCACG ATGA
|
|---|
| Protein sequence | MTDHAALAEE YGTPLFVYEA DTVAAQYTGL RQRLHPAMDI FYSLKANPNL ALCGHLRSLG
AGAEVSSLLE LTTAREAGVP PGDIVFPGPG KSREEITACL DAQIYAIICE SFEELELVND
LARERGVRAR VALRVNPAFA VKGSGLTMGG KPRQFGIDEA HLFALPGLRL AHLRVVGVHV
YLGTRILDET VIAENTRRIL ELAERLAAHL DFPLEFVDVG GGLGVAYFDG ERDLAVERLT
DLVNPVVADF HDRHRDTRLI MELGRYLVAP AGTYLIRVRY VKSSMGERFA VTDGGTHQHM
AAVGIGSFVK RDFPLRLLGR PTDGPLVRWT VTGPLCTPND TLVRAAELPD LRRGDLLGVL
RSGAYGPSAS PTLFLGHGHP AEVLVRNGVG CLVRHRDQVA DLLRQQRSLV TTGGDPR
|
|---|
| |