Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0365 |
Symbol | |
ID | 5703859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 424082 |
End bp | 425365 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269890 |
Product | major facilitator transporter |
Protein accession | YP_001535285 |
Protein GI | 159036032 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0592694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA CCGCGCAACC CCGGCCTGGT ACGCCGGTTC CCCCGCTGCG TCACAACCGT GACTTCCTCC TGCTCTGGAG TGGGACCGCC GTCTCCCTCG TCGGTCTGAC CGTATCGACC ATCGCCTACC CCTTGTTGAT CCTGGCCGTC ACTGGATCGA AGGCCGCAGC CGGTGTCGTC GGCTTCTTCT CGCTCCTGCC GTCACTGCTG TTCCAACTGC CGGCAGGGGT GCTGGTCGAC AGGTGGAACC GCCGTCGGCT GATGATCTGG TGTGACGTGA TCCGCGCCCT CGGCGCCGCG AGTGTGGTCC TCGCGCTGGC TCTCGACGAG CTGACGTTGG CGCATGTGGT GGTGGTGGGG TTCGTCGAGG GCACGATGTC GGTGTTCTTC AACCTCGCGG CACATGCCGC GGTGCCCAAC GTCGTTCATC CGGACCACCT GTCGACCGCA CTGTCGCGTA ACGAGGCACG TTCCCGGGCG GCGACCATGC TCGGCACCAC CCTCGGTGGC GTCCTGTTCG GCTTGAGCCG TGCCTTGCCG TTCGCGCTGC ACGCGGTCAC CCATGTGATC TCGCTGGTCA CGTTGTTGTT CATTCGGTCT GACTTCCAGA GCGACCGGCA GGTGCGTACC CGCACCACCG GGATGCTCGC CGAGGTCGGG GAAGGAACGC GCTGGCTGTG GCGCCAGCCG TTCCTGCGCA CGGCCGCGCT GCTCGTCGCC GGCAGTAACT TGCTGTTCCG CGCGCTGTTC CTTGTCGTCG TGGTGATGGC AACCGACGTC GGCGCGTCGC CGGCGGCGGT CGGTGTGCTG CTCAGTGTCG CCGGCGCTGG CGGGGTGCTC GGTTCCCTCG TCGCGGGCTG GTGTCAACGC CGGCTGCCGC TTTCGGCCCT GGTGGTCGGC GCGAACTGGG TGTGGGCCGT ACTCATGGGC GTGATCGTGC TCACTGACAG CCTGTATCTG CTCGCCGCCG CCTACGCCGC GATGTGGTTC GTCGGACCGG TGTGGAATGT CGCCGTCGCC ACCCATCAGC TCCGTGTCAC CCCGGACCGG CTGCGGGGTC GGGTCCTTGG CGCGATGGGC CTGCTCGCCA GCGGCGCGTT GCCGGTTGGC GCCCTGATCG GCGGTCTGCT CCTGGAATGG TCCGATGCGC GCACCGCCGC GCTGGTGCTC GCCGGCTGGA TGGTGCTGCT GGCCCTTGTC GCGACGATCG CCCCCTCGCT GCGAAGGGCG ATCGCACCTG TCGAGACCAC GACCACCCCC GACGCCGAAC CAGCCGTTCG ATGA
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Protein sequence | MTTTAQPRPG TPVPPLRHNR DFLLLWSGTA VSLVGLTVST IAYPLLILAV TGSKAAAGVV GFFSLLPSLL FQLPAGVLVD RWNRRRLMIW CDVIRALGAA SVVLALALDE LTLAHVVVVG FVEGTMSVFF NLAAHAAVPN VVHPDHLSTA LSRNEARSRA ATMLGTTLGG VLFGLSRALP FALHAVTHVI SLVTLLFIRS DFQSDRQVRT RTTGMLAEVG EGTRWLWRQP FLRTAALLVA GSNLLFRALF LVVVVMATDV GASPAAVGVL LSVAGAGGVL GSLVAGWCQR RLPLSALVVG ANWVWAVLMG VIVLTDSLYL LAAAYAAMWF VGPVWNVAVA THQLRVTPDR LRGRVLGAMG LLASGALPVG ALIGGLLLEW SDARTAALVL AGWMVLLALV ATIAPSLRRA IAPVETTTTP DAEPAVR
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