| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0137 |
|---|
| Symbol | |
|---|
| ID | 5706685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 147514 |
|---|
| End bp | 149274 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641269663 |
|---|
| Product | chromosome partitioning ATPase |
|---|
| Protein accession | YP_001535063 |
|---|
| Protein GI | 159035810 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0455] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.458231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000455541 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGACG AGAACCCCGA CCGGTCGTAC GCGCCCGGCC GGCAGCCGGC GCCGGAGCGG
GACATCGAAC CATTGTGGCC GGCGGCCCAG ACCACCCCAC CGTCCTGGTC GCCCGTGCCG
GCACCGGGCG GTCCCGGTCA GCCGCCCGGT GCCGGCGACG GGACACCGGT GCCCACGGGT
TGGGCGCCCC ACGTCCCTTC CGAAGCTGCC CGCGCCTGGG CTCCCCACCC GAACATCGAT
CCGGTCGGCG CGGCGTCCGA AACCCACGCT GCACTCACCA GCCAGGACGT GGTGCCGGCT
CCCCGGCCCG CTGTGGGCGT CAACCTGCAC CAACCCTTCG GCCTCGACCC GGTCGGCCCG
CCGGTCGGGG CACCGGCTGC CCTGACACCG ATCGGCCACC GACCGACCGC CGGGACGCCA
GCCGGGGGTG AGCCTGCCGG CGACGAAGCG GCCCCGGCTG GCCGCGGTGA CGCCCCGGCC
GAGTCGCCAT GGGCGCTGCC GCCGCAACGA CCGGCCACGA ACGGCACCCG CGGTTCCCAG
CTGGGCACCG ACTGGGAACC CACCGACCCG ACCACGCACC CCGGCACAGC CGCCCCCGCC
GGTGGTCCAG AATCCGGCCC GGCGCCGGCC CAAAACGGTC GGTCTCCGGA AGCGCCGGCT
CCGGGAGCGT GGGCCCCGCA CGCCGCAGCC CCGGAGCCGT CGGCCCCGCC GATTGCGGCC
AGGGCGGTCC CCCCGACGCC CTACCCGCCG CCTCCCGAAG GACCGGCCCC GGGCCACCAG
CCAGCGGCAA GCGTCAGCGC CGCGCTTCCG CCGGCCGGAT GGACGCCGAT GCCGGGAGCT
CCGCCGACCG CCGAGGACTT CGCCCGGCGC CGGCAGCTGC GCCCGATGGA CCCGATGGCC
ACCATGGGCG TCCGGGCCGT GGCCAACAAG ATGGGGCTTC GCCTACCGCC GGGCCGGCTC
GAACAGGAGC TACGCCGCGA CATCGAGATG GTCCGCCGCA ACTTCGGCGG GCTTCGGCAG
GTGACCGTGG TCAACCCGAA GGGCGGCGCC GGCAAGACCG TCGCGATCCT GCTGCTCGCC
ATGACCTTCG GCCAGAAGCG TGGCGGCTAC ATCCTGGCCT GGGACAACAA CGAGACGCAG
GGCACCCTGG GCATGCGTGC GCAGCAGGAC TTCCATGCCC GCACCGTGCG GGACCTGCTC
CGCGACCTGG CCCAGTTCCA GGGCTCCCAC GGGCGAGTTG GTGACCTGTC GCAGTACGTC
CGGGCCCAGG GCGAGGGCAT GTTCGACGTC CTCGCGTCGG ACGAGTCGGC CACCGGCGGC
GAGATGCTCA CCGCCGCCGC GTTCGGGGAG ATCCGCGAGG TGGTCAGCCG CTTCTACAAG
CTGATCTTCG TGGATACCGG TAACAACGTA CGGGCGCAGA ACTGGCAGGC CGCGATGGAC
GCCACCGACC AGTTGGTGGT GACCATGTCG GCCCGCAACG ACTCGGCCGA GACGGCCGCC
CGGATGCTCG ACCATCTGGA GCAGAGCGGT AGGCAACGGC TGGTACGGCA GGCGGTGACC
GTCGTGTCGA TGCCGCCGTC CCGCAAGGAG ATGGATCTGC CGGCGATCGA GGCGCACTTC
GCGGCGCGGA CCCGGGCAGT GCTGCTGGCC CCGTACGAAC GACTCATCGA CTCTGGCGAA
CCACTCCGGT ACGGAGCACT CTCGTCGGCG GCCCGGGACG CCTGGCTCAA GATCGCAGCC
GCGGTGGCCG AGGGCCTCTG A
|
|---|
| Protein sequence | MVDENPDRSY APGRQPAPER DIEPLWPAAQ TTPPSWSPVP APGGPGQPPG AGDGTPVPTG
WAPHVPSEAA RAWAPHPNID PVGAASETHA ALTSQDVVPA PRPAVGVNLH QPFGLDPVGP
PVGAPAALTP IGHRPTAGTP AGGEPAGDEA APAGRGDAPA ESPWALPPQR PATNGTRGSQ
LGTDWEPTDP TTHPGTAAPA GGPESGPAPA QNGRSPEAPA PGAWAPHAAA PEPSAPPIAA
RAVPPTPYPP PPEGPAPGHQ PAASVSAALP PAGWTPMPGA PPTAEDFARR RQLRPMDPMA
TMGVRAVANK MGLRLPPGRL EQELRRDIEM VRRNFGGLRQ VTVVNPKGGA GKTVAILLLA
MTFGQKRGGY ILAWDNNETQ GTLGMRAQQD FHARTVRDLL RDLAQFQGSH GRVGDLSQYV
RAQGEGMFDV LASDESATGG EMLTAAAFGE IREVVSRFYK LIFVDTGNNV RAQNWQAAMD
ATDQLVVTMS ARNDSAETAA RMLDHLEQSG RQRLVRQAVT VVSMPPSRKE MDLPAIEAHF
AARTRAVLLA PYERLIDSGE PLRYGALSSA ARDAWLKIAA AVAEGL
|
|---|
| |