Gene Dshi_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2628 
Symbol 
ID5713526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2785975 
End bp2786685 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID641268552 
Producthypothetical protein 
Protein accessionYP_001533962 
Protein GI159045168 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.569384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0429489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA CGATCTATAC CCGCGCGCTC GGCCAGCTGA GCGATCCGGC GTTTCGTCGG 
GTCCTGCTGA TCGGGATCGG GGCGACGGTG GTCCTGCTGG TGGCGATCGC CTGGGTGTTC
GTGACCCTGC TGGGCTGGCT GGTGCCCGAT GCGCTGACAC TGCCCTTTGT CGGCGAGATC
ACCTGGCTGG ACGATCTGGC CTCGGGCCTC GGCATCCTGA GCATGCTGGG GCTGTCGGTG
TTCCTGATGG TGCCGGTGGC CTCGGCCTTC ACGTCGCTGT TTCTGGAGGA CATCGCCGAT
GCGGTGGAGG CACGCCATTA CCCCGGCCTG CCGCCCGCGC CGAAGGTCAG CTTCGCCGAC
GGGCTGCGCG ATACGTTCGG GTTTCTCGGG GTGCTGGTGG TCGCCAACCT CGCGGCACTG
GTGCTGTATC TGTTCTTCGT CCCGCTCGCG CCACTGATCT TCTGGGGGCT CAACGGGTTC
CTTCTGGGCC GGGAATACTT CCAGGTCACC GCCATGCGCA GACTGGGCCG TCAGGGGGCC
GCGCAGATGC GCAAGCGCCA TATCGGCAAG ATCTGGCTCG CCGGGGTGCC GATGGCGATG
GTGCTGTCCT TGCCCCTGGT GAACCTGGTG ATCCCGGTTG TGGGGGCCGC GGCCTTCACC
CACCTCTATC ACACGCTCGC CGGGTCGGAG CGGGGCAAGG ATTTTACTTA A
 
Protein sequence
MIVTIYTRAL GQLSDPAFRR VLLIGIGATV VLLVAIAWVF VTLLGWLVPD ALTLPFVGEI 
TWLDDLASGL GILSMLGLSV FLMVPVASAF TSLFLEDIAD AVEARHYPGL PPAPKVSFAD
GLRDTFGFLG VLVVANLAAL VLYLFFVPLA PLIFWGLNGF LLGREYFQVT AMRRLGRQGA
AQMRKRHIGK IWLAGVPMAM VLSLPLVNLV IPVVGAAAFT HLYHTLAGSE RGKDFT