| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2495 |
|---|
| Symbol | |
|---|
| ID | 5713392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2651711 |
|---|
| End bp | 2652277 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641268419 |
|---|
| Product | putative cytochrome B561 |
|---|
| Protein accession | YP_001533830 |
|---|
| Protein GI | 159045036 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.943457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA AAACCGAAAC CCTCCAACTC AAGGACAGCC CCGCGGCATA CGGGGCGATC
TCCAGGGTCA ATCACTGGGG CGTTGCCCTC GGCATGATCG CATTGCTCGG CTCCGGGCTG
CTCATGGCCT ACGGACCGCT CACCCGCGAG GCCGTGGCCC CGATCCGGGA TTGGCACAAG
GCCCTCGGCG TCGTGGTCCT GATCGTCGGG CTGTGGCGGG TGGGCTGGCG CCTGGCACAG
GGGGCGCCGA GACCGGCCTC CGACATGCCA CCCTGGCTGG CCCGCGCGGC GAAGGCGGTG
CACTGGGGTT TGCTCGCCAC GGTGCTCGCG ATGCCGATCT CCGGCATCCT GATATCGGTC
TATAACGGGC GGGCGGTCAC GTCCTTTGGG GTGGTTATCC CCGCCCAGGA CAAGGTTGGC
TGGATTGCAA ATGCGGCCCA CGGGGTCCAT CAGTTTGCAG GCTGGGCGCT GGCCGGGCTG
CTGGTCGTGC ATGTCGCGGG TGCGCTCAAA CACCATTTCC TGGACCATGA CGCCACCCTG
CGGCGCATGC TGCGCGGGGC CGCCTGA
|
|---|
| Protein sequence | MAQKTETLQL KDSPAAYGAI SRVNHWGVAL GMIALLGSGL LMAYGPLTRE AVAPIRDWHK
ALGVVVLIVG LWRVGWRLAQ GAPRPASDMP PWLARAAKAV HWGLLATVLA MPISGILISV
YNGRAVTSFG VVIPAQDKVG WIANAAHGVH QFAGWALAGL LVVHVAGALK HHFLDHDATL
RRMLRGAA
|
|---|
| |