Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2487 |
Symbol | |
ID | 5713383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2642133 |
End bp | 2643338 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268410 |
Product | putative 47 kDa protein |
Protein accession | YP_001533822 |
Protein GI | 159045028 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGACC GACTCCCCGT AACCGTGCTC TCGGGATTTC TCGGGGCAGG AAAGACAACA CTGTTGAACC GCGTGCTCAA CAACCGCGAC GGACGCAAGG TCGCGGTCAT CGTCAACGAC ATGTCCGAAG TGAATATCGA CGCCGACCTC GTGCGCGCCG AAACCGCGCT CAGCCGCACC GACGAGACTT TGGTCGAGAT GTCCAACGGC TGCATCTGCT GCACCCTGCG CGACGACCTG CTGCACGAGG TGCGCAGGCT CGCGGCGGCG GGGAAGTTCG ACTACCTGCT GATCGAATCC ACCGGCATCT CCGAGCCGCT GCCCGTGGCC GCCACCTTCG AGTTTCGCGA CGAAGCGGGC GAGAGCCTGT CAGATGTCGC CCGGCTCGAC ACGATGGTGA CGGTCGTGGA TGCGGTGAAC CTGCTGCGCG ATTATGCCAG CCATGATTTT CTGCGCGATC GCGGCGAAAC GCTGGGAGAG GCGGATGACC GCACCCTGGT GCATCTGCTC ACCGACCAGA TCGAGTTTGC CGATGTCGTG ATCCTGAACA AGGTCGCAGA TGCCGGGCCC GAGCGCACCG ATGCCGCACG CCAGATCATC CGCAGCCTGA ATGCCGATGC CAAGATCATC GAGACCGACC ATGCCCAGGT CGCCGTGTCC GAGATCCTGG GCACCGGCCT GTTCGATTTC GACAAGGCCC ATGACCACCC GCTCTGGGCC AAGGAGCTCT ACGGCTTTGC CGACCATGTC CCCGAAACCG AGGAATACGG GGTGGCGAGC TTCGTCTACC GCGCCCGCCG TCCCTTCGTG CCCGAAGCGG CGATGGCCGT GCTCGAGGGC GAGATGCCCG GCGTGATCCG CGCCAAAGGG CATTTCTGGC TCGCCACCCG CCCCGACTGG GTGGCGGAGT TCTCGCTCGC GGGCGCGCTG TCCTCGGTCC GGCCGCTGGG CACCTGGTGG GCGGCGGTCC CCGAGGCCCG CTGGCCGGAA AGCGCGGCCG CGCGTGCCTA TTTCACACAG CACTGGCAGG AGCCATGGGG TGACCGGCGG CAGGAGATCG TCTTCATCGG TGTCGGGATC GACTGGCCCG CCCTCAAGGC CCGGCTCGAC GCCTGCCTGC TGCCCGAAGA CTTGGCGACC GGCCCCGACA CCCTGCCGGA CCTGCCCGAT CCCTTCCCGG CCTGGCGCCG GGCGGAGGCC GCGTGA
|
Protein sequence | MQDRLPVTVL SGFLGAGKTT LLNRVLNNRD GRKVAVIVND MSEVNIDADL VRAETALSRT DETLVEMSNG CICCTLRDDL LHEVRRLAAA GKFDYLLIES TGISEPLPVA ATFEFRDEAG ESLSDVARLD TMVTVVDAVN LLRDYASHDF LRDRGETLGE ADDRTLVHLL TDQIEFADVV ILNKVADAGP ERTDAARQII RSLNADAKII ETDHAQVAVS EILGTGLFDF DKAHDHPLWA KELYGFADHV PETEEYGVAS FVYRARRPFV PEAAMAVLEG EMPGVIRAKG HFWLATRPDW VAEFSLAGAL SSVRPLGTWW AAVPEARWPE SAAARAYFTQ HWQEPWGDRR QEIVFIGVGI DWPALKARLD ACLLPEDLAT GPDTLPDLPD PFPAWRRAEA A
|
| |