Gene Dshi_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2386 
Symbol 
ID5714042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2520173 
End bp2520634 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID641268311 
Producthypothetical protein 
Protein accessionYP_001533723 
Protein GI159044929 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0841233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGC GCGAGAAGAT CTCCTCGGGC CTGAAGGCCG CGATGAAGGA GAAGGACGCC 
GCCCGGTTGT CCACCCTGCG GCTCATCAGT GCCGCGATCA AGGACAAGGA CATTGCCCTG
CGCGGCCAGG GCAAGCCCGA GGGCGTGTCC GAGACGGACA TCATGGCGAT CCTGGGAAAG
ATGGTGAAGC AGCGCCAGGA GACCGCGCGC ACCTATGAAG AGGCCGGGCG GCTGGAGTTG
GCCGCGCAGG AACTGGCGGA GATCGAGGTG ATCGAGGAAT ACCTGCCCAC CCCGCTCAGC
GAGGACGAGA TCGACGCGGC GATCGACGAC ACGATCACGG CACTGGAGGC GGACTCGATC
CGCGACATGG GCCGGGTGAT CGGCGCGCTG AAGACCCGCT ACACCGGCCG GATGGATTTC
GGCCGGGTGG GGCCGATGGT CAAGGACCGG CTCAGCGCCT GA
 
Protein sequence
MDLREKISSG LKAAMKEKDA ARLSTLRLIS AAIKDKDIAL RGQGKPEGVS ETDIMAILGK 
MVKQRQETAR TYEEAGRLEL AAQELAEIEV IEEYLPTPLS EDEIDAAIDD TITALEADSI
RDMGRVIGAL KTRYTGRMDF GRVGPMVKDR LSA