| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2125 |
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| Symbol | |
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| ID | 5713121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2255710 |
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| End bp | 2256606 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268047 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_001533462 |
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| Protein GI | 159044668 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCA AATTCACCAA TCTGCAAACC GACCTGCTGC GGACCTTCGT GACGGTGGTT
GATCTGCGTA ACTATACGGA AACCGGGCGC ATTCTCGGCC GGACGCAACC GGCCATATCG
CTTCAGATCA AGCGGCTCGA GGAGATCACC GGCAAGAAAC TGCTGGCCCA ACAAGGCAAG
CAGGTGGAGT TGACGCCGGA CGGACAGACC CTGCTGGGCT ATGCCCGCGA GATGTTGCGC
CTCAACGACC GGGCCGTTGC GAACCTGCAG CAAGCGTCCA TCCTGGGCAC GCTCCGCGTC
GGCCTGCCGG TGGATTACGC GATCGAGTAT TTCCAGAGCA TCATCACCAG GTTCGCCCGC
GAGAACCCTG CCGTTCAATT GGACATTCGC TGCAACCGCA GCCCGGATCT TCTATCGGCG
CTGCATGTGG ACGACCTCGA CATGACCATA GCCATAACCG ATTCGATGCC CGCACCCCAT
GTCTCGGTCT ACTGGTCCGA GCATCCGGTC TGGGTCTGCG CCCGCGACCA CAGAATCGAT
CCGGACCAGC CGCTCAAGGT CGTCGCGCAT CCCAACGGCT GCTTCTACCG CAAGCGCATG
ATCGACGCGC TGAACACCGA AGGGCGGGAC TGGCGGATTT CGTTCGAGAG CCTGGGCGTG
TCTGCCCTGC AAAAGGCGGT GCTGGACGGT ATGGGCGTCA CGGCGCTGAC CAAGAAGACG
TTGCTGCCCG GAATGCGGCT GCTGAGCCCC GGCGAGGGGT TTCCCAACCT CGCAAACATC
CATGTGGGCC TGTTCTACAA ACATGTGAAG ATGTCCGACG CCGCCCTGAA ACTGATCGAG
AAGATCACCG AGGATGTGTC CACCTTCCGG CTTCCGACGC GCGCGCGCAC CAAGTGA
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| Protein sequence | MARKFTNLQT DLLRTFVTVV DLRNYTETGR ILGRTQPAIS LQIKRLEEIT GKKLLAQQGK
QVELTPDGQT LLGYAREMLR LNDRAVANLQ QASILGTLRV GLPVDYAIEY FQSIITRFAR
ENPAVQLDIR CNRSPDLLSA LHVDDLDMTI AITDSMPAPH VSVYWSEHPV WVCARDHRID
PDQPLKVVAH PNGCFYRKRM IDALNTEGRD WRISFESLGV SALQKAVLDG MGVTALTKKT
LLPGMRLLSP GEGFPNLANI HVGLFYKHVK MSDAALKLIE KITEDVSTFR LPTRARTK
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