| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1220 |
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| Symbol | |
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| ID | 5711778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1260637 |
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| End bp | 1261623 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267132 |
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| Product | hypothetical protein |
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| Protein accession | YP_001532563 |
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| Protein GI | 159043769 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.216947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.506898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGA ACTTTACCCG CCGCGTCGCA CTGACGATCG CAACTGCCGC TGCCACCTCG
ATCGCGCTGC CCGCCTTCGC AGACGACGAC TGGAAGCCGA ACAAGCCGAT CGAGATGGTG
ATCATGGCCG GTCAAGGGGG CGGCGCGGAC CGTCTCGCGC GTCTGTTCCA GTCGATCATC
CAGAAGGAAA ACCTCGCCTC CATGCCGGTG CTGCCGGTCA ACAAGGGCGG CGGCTCCGGC
GCCGAGGCGC TGCGCTACCT CAAGGACAAG GAAGGCGACT CCCATGTCAT CATGGCGACG
CTGAACAGCT ACTACACCAC CCCGATCCGC ACCGACATCG GTGTCGACAT CGAAGAGTTC
ACCCCGCTGG CACGCATGGC GCTCGACACC TTCGTGCTCT GGGTCAACGC CGACAGCGAC
ATCTACACCC TCGAAGACTA CGTGGCGGCG GTGAATGCCT CCGGCGGCGC GTGGAAGATG
GGCGGCACCG GCACCGGGCA GGAAGACAGC CTCGTGACCG CGATGCTGGA GAAGGAATTC
GGTATCAAGC ACACCTATGT GCCCTTCAAC GGCGGCGGCA CAGTCGCCAA GAACCTGGTG
GGCGGGCATA TCGACAGCAC CGTCAACAAC CCGTCCGAGG CGATGGGCTT CTGGCAGGCG
GGCAAGGTGC GCCCGATCGC GGCCTTCACG CCCGAGCGCC TGGCCGTCTT CCCGGACGTG
CCCACGGCGA CCGAACTGGG CCATGAGAGC CTGGTCTACT GGATGCAGCG CTCCTTCGTC
GGGCCCAAGG ACATGCCGGC AGAGGCCGTG GCCTATTACA CCGCCATGTT CGAGGGCCTC
GCCCAGACCG AGGAATGGCA GACCTACACC CAGGAGAAGG CCCTGATGGC CGACTTCCTG
ACCGGGGATG CCCTGCAGGC GTACTTCCTG GAAGAGCGCG ACAAGCACGC TGCGATCCTG
CAGGAAATGG AAGGCACCGG TTCCTGA
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| Protein sequence | MTLNFTRRVA LTIATAAATS IALPAFADDD WKPNKPIEMV IMAGQGGGAD RLARLFQSII
QKENLASMPV LPVNKGGGSG AEALRYLKDK EGDSHVIMAT LNSYYTTPIR TDIGVDIEEF
TPLARMALDT FVLWVNADSD IYTLEDYVAA VNASGGAWKM GGTGTGQEDS LVTAMLEKEF
GIKHTYVPFN GGGTVAKNLV GGHIDSTVNN PSEAMGFWQA GKVRPIAAFT PERLAVFPDV
PTATELGHES LVYWMQRSFV GPKDMPAEAV AYYTAMFEGL AQTEEWQTYT QEKALMADFL
TGDALQAYFL EERDKHAAIL QEMEGTGS
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