Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0627 |
Symbol | |
ID | 5712086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 624736 |
End bp | 625491 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641266535 |
Product | basic organic compound ABC-transporter |
Protein accession | YP_001531974 |
Protein GI | 159043180 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGACT TCCACACCCA TCCGGAGCTG GAGCTTGGCG ACAAGCTTCT CGAAGCCCGC GACATCGTGC TGATGCGCGG CGGCAAGCGG CTGCTCGACG GTGTCGACCT GTCCCTGCCT GCCGGTCGGC GCACGGTGAT CATGGGGGCC AATGGCGCGG GCAAGAGCCT GCTGCTGCGG GTCCTGCACG GGCTCATTGC GCCCGATGCG GGCCAGGTCC TCTGGCACGG CGCCCCCCTG TCGGCAGAGG CGCGGCAGGC GCAATCTATG GTGCTGCAGC GCCCGGTCCT GCTGCGACGC TCGGTTCTGG GCAACCTGCG CTTCGCCCTG TCGGTCCGCG GCATCCGCGG CAAGGAGCGC GCGGCCCGCG AGGCCGAGGC GCTCGACCGT GCGGGGCTGT CCGAGTTTGC CCGCCGCCCG GCGCGGGTGC TCTCGGGGGG CGAGCAGCAA CGTCTCGCCG TGGCGCGGGC CCTGTCCACC GCGCCCCGGA TGCTCCTGCT CGACGAGCCG ACTGCCAGCC TCGATCCCGC CGCCACGCGG CAGATCGAAA GCCAGATCAA CGCGGCCCAT GGTGCCGGGG TCACTGTCGT GATGGTCACC CATGATCACG GCCAGGCGAG GCGGATGGCG GATGATATCC TCTTCCTGCA CCGGGGCCGC GTGGCCGAGG CCGGGCCGGC GCAGCAGGTG CTCACCGCGC CGCGCAGCGC CGCGGTCGCC GCCTGGCTCG ACGGCCGGTT CTACGACGGC CCCTGA
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Protein sequence | MRDFHTHPEL ELGDKLLEAR DIVLMRGGKR LLDGVDLSLP AGRRTVIMGA NGAGKSLLLR VLHGLIAPDA GQVLWHGAPL SAEARQAQSM VLQRPVLLRR SVLGNLRFAL SVRGIRGKER AAREAEALDR AGLSEFARRP ARVLSGGEQQ RLAVARALST APRMLLLDEP TASLDPAATR QIESQINAAH GAGVTVVMVT HDHGQARRMA DDILFLHRGR VAEAGPAQQV LTAPRSAAVA AWLDGRFYDG P
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