Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0454 |
Symbol | pqqE |
ID | 5711370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 440580 |
End bp | 441686 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641266358 |
Product | pyrroloquinoline quinone biosynthesis protein PqqE |
Protein accession | YP_001531803 |
Protein GI | 159043009 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCCC CGCCCCCCAT CGCGATGCTG GCCGAGCTGA CCTATCGCTG CCCGCTTTCC TGCCCCTATT GCTCGAACCC GATCGAGATG GCCCGCAAGG AGGCTGAACT CGATACAGGC ACCTGGGAGC GGGTGTTTCA GGAGGCGGCC GAGCTCGGCG TGCTACAGTT GCACCTTTCA GGGGGGGAGC CCGTCTCACG GCGCGACATT GTCGATCTGG TGGCGGCCGC TCGCGCGGCG GGCCTCTATA CCAACCTTAT CACCTCCGGC ATCGGCCTTA CCGAGCGGCG GCTGGCCGAC CTGGATGCGG CTGGGCTCGA TCATATCCAG CTGTCTCTGC AAGGGACCGA CCCGGCGATG GCCGACGAGA TCGGCGGCTA CAAGGGCGGT TTTGCACGCA AGATGCAGGT CGCGGAGTGG ATCGGGGCCA TCGGCTTTCC GCTGACGCTC AACGCGGTCC TGCACCGGCG CAACCTCCAC CAGCTGCCCC GCGCGTTGGA CATGGCGCTC GAGATGGGCG CGCGCCGGAT CGAGGTTGCC ACGGTCCAGT TCCATGGCTG GGCGCTCAAG AACCGGGATG CGCTCATGCC CACCCGCGAC CAGGCCCGCG AGGCCACCGC CATCGTCGCC GAGGCGCGTG CGCGCCTCAA GGGCAGGCTG GTCATCGACT ACGTCCCCGC CGATTATCAC GAGGACTATC CGAAGCGGTG TATGGGTGGC TGGGGCACGT CCGGGCTCAA CGTCACGCCG GATGGCACTG TCCTGCCCTG CCACGCGGCG CACTCGATCC CTCATCTGAC CTTTGAGACG GTCTTGGACC GCAGCCTGTC GGACATCTGG TACGAGGGCA TGGCCTTCAA CGCCTATCGC GGCACGGACT GGATGTCCGA ACCCTGTTCC AGCTGCGAAC GCAAGACCGT CGATTTCGGC GGCTGCCGCT GTCAGGCCAT GGCGATCCTC GGGGACGCCA ACGCGACGGA CCCGGTCTGC GTGAAATCCC CCCATCACGG AGCGCTCCAA AGTCAGGCCG ACGCACATGC GGCTCGCGAT GACACGCCGC TGGTCTACCG TGTATCTCCG GGCACAACGC CGGAGCCTGT GCAATAG
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Protein sequence | MRPPPPIAML AELTYRCPLS CPYCSNPIEM ARKEAELDTG TWERVFQEAA ELGVLQLHLS GGEPVSRRDI VDLVAAARAA GLYTNLITSG IGLTERRLAD LDAAGLDHIQ LSLQGTDPAM ADEIGGYKGG FARKMQVAEW IGAIGFPLTL NAVLHRRNLH QLPRALDMAL EMGARRIEVA TVQFHGWALK NRDALMPTRD QAREATAIVA EARARLKGRL VIDYVPADYH EDYPKRCMGG WGTSGLNVTP DGTVLPCHAA HSIPHLTFET VLDRSLSDIW YEGMAFNAYR GTDWMSEPCS SCERKTVDFG GCRCQAMAIL GDANATDPVC VKSPHHGALQ SQADAHAARD DTPLVYRVSP GTTPEPVQ
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