Gene Dshi_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0419 
Symbol 
ID5711335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp411331 
End bp412584 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content67% 
IMG OID641266324 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001531769 
Protein GI159042975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGTCGC TATTGACGGC CACGGTCGCG CTGATGGCCG GGAACGGTCT GTTGGGTGTC 
GTGCTGCCCC TGCGCATGGA GGCGGCGGAG TATCCCGTCG CTCTGACCGG GGCGATCATG
GCGGCTTATT ACCTCGGGCT CGCATTGGGG GGATTTCGGG CCAAGCGGGT CATTCTACGC
ATCGGTCACA TCCGCGCCTT CGCGGCCTTC GCGGCGCTGA CCTCGACTGT TTGCCTGGCG
TATGCGTTCT TCTTCAACCC CGCGGCCTGG GTGCTCCTGA GGGTGATCAA CGGGTTCTGC
ATCGCGGGCA TGACGACAAC CATCGAAAGC TGGCTCAACG AACGCAGTAG TAACGCCACC
CGCGGGCGCG TTCTGGGCTA TTACATGCTG GCCTTCTATC TCGCGATTGC GCTGGGTCAG
ACCCTGGTGA ACGTCGCGCC CGTCAACGGT GACGATCACC TGATGATCGC CGCGGCCCTG
ATCGGCTTGT CACTGGTTCC CGTCGCGATG ACCCGCCTGG GCGAGCCTGA CCTGCGCGAG
GTGCGCAGCC TGGGGGTGGG GGACCTGTAT GCCGCGTCGA AGGTCGGTGT CGTGGGTGCC
AGCGTGGCCG GCATTCTGGT CGGATCCTTC TATGCCCTGG CCATGGTGTT CGCCCGGCAG
ATCGGCCTCG GCGTCACCGA GGCGGCGTTG TTCATGAGCA CCGTGGTCAT CGGCGGGCTG
GCCGCACAGG TGCCCGTGGG CATGCTGGCG GACCGGTTCG ACCGGCGTAT CGTCATGGCC
TGCATCCTGC TGGCCGTGGG GCTGTCCTGG GGCCTTCTTT CTGGCGCGAT CACCAATGGG
GGGGTGCCGC TTGCGGTGCT GGTCGTCATG GCGCTGGCCT TCGGCGGGGC GATCAGCTCT
GTCTATCCGC TCTGCGTTGC GCAGACTTTC GACCGGCTGG ACCGCCGGGC CTATGTCGCG
GCTTCGGGGC GGCTTTTGAT GATCTATTCC ATCGGGGCGA CCATCGGGCC GTTGCTGGCC
TCGGCATTGA TGTCGGTTTA CGGGCCCCGC TCGTTCTTCC TGTTCGAGTC GGCGCTGGCC
ATGGCTTACG CGTGTTTCGT GTTGCTGCGG GTCGTGACGG GCGCGAAACC GCCCGCCGCG
GGGGAGCGGG AGAAATACGT GCCCTTGCCC GACACCTCTG CGGTGGCGAG CGCACTCGAT
CCGCGGACCG AGCCGGAGCC GGAGCCCGTG GCCCAGCCGG ACCCGAAACC ATAG
 
Protein sequence
MRSLLTATVA LMAGNGLLGV VLPLRMEAAE YPVALTGAIM AAYYLGLALG GFRAKRVILR 
IGHIRAFAAF AALTSTVCLA YAFFFNPAAW VLLRVINGFC IAGMTTTIES WLNERSSNAT
RGRVLGYYML AFYLAIALGQ TLVNVAPVNG DDHLMIAAAL IGLSLVPVAM TRLGEPDLRE
VRSLGVGDLY AASKVGVVGA SVAGILVGSF YALAMVFARQ IGLGVTEAAL FMSTVVIGGL
AAQVPVGMLA DRFDRRIVMA CILLAVGLSW GLLSGAITNG GVPLAVLVVM ALAFGGAISS
VYPLCVAQTF DRLDRRAYVA ASGRLLMIYS IGATIGPLLA SALMSVYGPR SFFLFESALA
MAYACFVLLR VVTGAKPPAA GEREKYVPLP DTSAVASALD PRTEPEPEPV AQPDPKP