| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0297 |
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| Symbol | rplE |
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| ID | 5711547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 291470 |
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| End bp | 292033 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266193 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001531647 |
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| Protein GI | 159042853 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.882379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGACG CTGCCACCTA TACACCGCGC CTGAAGGCGG CCTATGCGGA GACGATCCGC
GCCGCCATGA AGGAAGAGTT CGGTTACAAG AACGACATGA TGATCCCGCG CCTGGACAAA
ATCGTCCTGA ATATCGGCGC CGGGGCCGAG GCCGTGAAGG ACAGCAAGAA GGCCAAGTCG
GCTCAGGACG ACCTGAGCGC GATTGCCGGT CAGCGGGCGG TCATCACCAA GGCCAAGAAG
TCCATCGCGG GCTTCCGGGT GCGTGAAGAC ATGCCGCTCG GCGCCAAGGT CACCCTGCGC
GGCGACCGCA TGTACGAGTT CCTCGATCGT CTGATCACCA TCGCCATGCC CCGCATCCGC
GACTTCCGCG GCGTGAAGGG CTCGGCCTTC GACGGGCGGG GCAACTATGC CCTGGGGCTC
AAGGAACACA TCGTCTTCCC CGAGATCAAC TTCGACAAGG TCGATGAGGT CTGGGGCATG
GACATCATCA TCTGCACCAC CGCGGCTTCG GACGCGGAAG CGAAAGCGCT GTTGAAGCAT
TTCAACATGC CCTTCAACTC GTGA
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| Protein sequence | MLDAATYTPR LKAAYAETIR AAMKEEFGYK NDMMIPRLDK IVLNIGAGAE AVKDSKKAKS
AQDDLSAIAG QRAVITKAKK SIAGFRVRED MPLGAKVTLR GDRMYEFLDR LITIAMPRIR
DFRGVKGSAF DGRGNYALGL KEHIVFPEIN FDKVDEVWGM DIIICTTAAS DAEAKALLKH
FNMPFNS
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