Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0285 |
Symbol | rplB |
ID | 5711535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 285409 |
End bp | 286251 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266181 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001531635 |
Protein GI | 159042841 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCA AGTCGTATAA GCCGACGACG CCGGGCCAGC GTGGGCTGGT TCTGATCGAC CGTTCCGAGT TGTGGAAAGG CCGTCCGGTC AAATCCCTCA CCGAGGGTTT GTCCAAGAAG GGTGGCCGGA ACAACACTGG ACGGATCACG ATGCGCCGCC GGGGTGGCGG GGCAAAGCGT CTCTACCGGA TCGTGGATTT CAAGCGTCGC AAGTTCGACG TGGAAGGCGT GATCACCCGG ATCGAATATG ACCCGAACCG GACCGCCTTC ATCGCGCTGG TCACCTACAC CGATGGCGAG CAGGCCTATA TCCTGGCCCC TCAGCGGACT GCCGTGGGCG ACAAGGTGGT GGCCTCTCAG AAGGCCGACA TCAAGCCGGG CAACGCGATG CCGTTCTCGG GCATGCCGAT CGGCACGATC GTGCACAACA TCGAGCTCAA GCCCGGCAAG GGCGGCCAGA TCGCCCGTGC GGCGGGCACC TATGCCCAGT TCGTCGGCCG CGATGGCGGC TACGCCCAGA TCCGTCTGAG CTCGGGCGAG CTGCGGCTTG TGCGGCAGGA ATGCATGGCC ACCGTCGGTG CCGTGTCGAA CCCGGACAAT TCGAACCAGA ACCTCGGCAA GGCGGGTCGC AACCGGCACA AGGGCATTCG TCCTTCCGTG CGCGGTGTCG TGATGAACCC CGTCGATCAC CCCCATGGTG GTGGTGAGGG CCGGACCTCT GGCGGGCGTC ACCCGGTCAC CCCCTGGGGC AAGCCGACCA AGGGGGCCCG TACCCGCAAC AAGAACAAGG CGTCCAGCAA GCTGATCATC CGCTCGCGGC ACGCCAAGAA GAAGGGCCGC TGA
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Protein sequence | MALKSYKPTT PGQRGLVLID RSELWKGRPV KSLTEGLSKK GGRNNTGRIT MRRRGGGAKR LYRIVDFKRR KFDVEGVITR IEYDPNRTAF IALVTYTDGE QAYILAPQRT AVGDKVVASQ KADIKPGNAM PFSGMPIGTI VHNIELKPGK GGQIARAAGT YAQFVGRDGG YAQIRLSSGE LRLVRQECMA TVGAVSNPDN SNQNLGKAGR NRHKGIRPSV RGVVMNPVDH PHGGGEGRTS GGRHPVTPWG KPTKGARTRN KNKASSKLII RSRHAKKKGR
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