Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0133 |
Symbol | |
ID | 5711601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 132102 |
End bp | 133061 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266028 |
Product | putative type I secretion target repeat protein |
Protein accession | YP_001531483 |
Protein GI | 159042689 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.749153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGAAGT CTGACGGAGA TCACACCTAT ACAAGCCTGG GCTGGCCGAA CGACGCCTAC TATTTGGCCG AGGGCACGGA GCTGAACGTC ATGAAGATGT CCCTCGTCGA CAAGGACGAG GACGGCGATA TCGGCCCCGG CGACATGATC AACGGCCTGG AAGTCACAGA CTCGTATCTC GGCGACTGGA TCGGCTTCGA CTCCGGCGAA GGCGAGCAGT GGGTCTATGG TGTGACCTTC TACCTCGAAG ACGGGTCGCA GGTCTTCATG GCCACCGATG GCACCCAATT GCAGGATGCC AAGTCTACGG GTTGCAAATG GGTGCTGGAG AGCACCGATG TGCCTGTCAA GCAGATCACC GCCCCTTGTT TCGTCGCGGG AACGCGTATC CTGACCCCCG AAGGAGTCGT GCCGGTCGAA ACCTTGCGCC CCGGGGATCT TGTGCAGACG CGGGATCACG GGGCGCAGCC CGTGCTCTGG GTCGGGCGCA GGACCCTTCC GGGCAGCGAG GCCCTGGCGC CGATCCGCTT CTCGCCCGAC GCGCTCGGAT CCGACCGCCC GCTCTACGTA TCCCCCCAGC ATCGGATGCT GCTGTCGGAT CCCCGCCTCT TACTCCTCTT CGAAGAGGCT GAGGTCCTTG CCGCCGCCCT GCACCTCGTC AATGGCCACA GCGTGGTACA GGCGCCACGC GCGCGCGTGA CCTATATCCA CCTGCTATTT GCACGGCACG AGATCGTCTA TGCCGAGGGG ATCCCGAGCG AGAGCTTTCA TCCCGGCATG GCCGGTCTCG CGGGCTTTGG CGATGCCGCG CGAGACGAGC TCTTGGGCTT TTTCCCGCAG CTGGCAGACC TTGATGCCGG TTTCGGCCCC TGCGCCCGCC GCGTGTTGCG CGCCCATGAG GCCGCGGTCG CAGCACAGCT GGTCATCGGC CGCGGCGCGC ATGCCGCGAT GGCGGCCTAG
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Protein sequence | MAKSDGDHTY TSLGWPNDAY YLAEGTELNV MKMSLVDKDE DGDIGPGDMI NGLEVTDSYL GDWIGFDSGE GEQWVYGVTF YLEDGSQVFM ATDGTQLQDA KSTGCKWVLE STDVPVKQIT APCFVAGTRI LTPEGVVPVE TLRPGDLVQT RDHGAQPVLW VGRRTLPGSE ALAPIRFSPD ALGSDRPLYV SPQHRMLLSD PRLLLLFEEA EVLAAALHLV NGHSVVQAPR ARVTYIHLLF ARHEIVYAEG IPSESFHPGM AGLAGFGDAA RDELLGFFPQ LADLDAGFGP CARRVLRAHE AAVAAQLVIG RGAHAAMAA
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