Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0034 |
Symbol | |
ID | 5711656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 36904 |
End bp | 37551 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641265928 |
Product | ATP-dependent protease La (LON) domain protein |
Protein accession | YP_001531384 |
Protein GI | 159042590 |
COG category | [R] General function prediction only |
COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.174994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000554508 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACTTT CGGCTGCAGA CCTGCCCGAC ACCATCCCCG TCTTTCCGCT GCCCGGAGCC CTGCTCCTGC CGCGGGCCCG GTTGCCCCTT CACATCTTCG AGCCGCGCTA CCTCGCCATG CTCGAAGATG CGCTGAAGAC GCCCCACCGG CTGATCGGCA TGGTGCAGCC GCGCGAAGTG CCCGGCTCCA AGGACCGCCG CCTGCACAGC ATCGGCTGCG CGGGCCGGGT CTCGGCCTTC TCCGAGACCG AGGACGGGCG CTACATGATC ACCCTGAACG GCATGTCGCG CTTCCGCATC ACCCGCGAGG TCAGCGGTTT CACCCCGTAT CTCAAGGCAG ACGTGACCTG GGACGATTTC GGCCGTGACC TGGGCAAGAC CGAAGAAGAC CCGGGCTTCC AGCGCGGCGC CTTCCTCGAC CTCTTGCGCC GGTTCTTCGA AGACCAGGAC ATGCGTACCG ACTGGGACAG CCTGTCGGAG GCCGAGGACG AGTTGCTGAT CAACTCGCTC TCGATGCTCT GCCCCTTCGA TCCGGAGGAC AAGCAGGCCC TGCTGGAGGC GCCCTCGCTC TCCACCCGGC GCGAAACCCT CGTCACCCTG ATCGAGTTCG CCCTGCGCGG CGGCTCCAGC GAGGAATTGC TGCAATGA
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Protein sequence | MKLSAADLPD TIPVFPLPGA LLLPRARLPL HIFEPRYLAM LEDALKTPHR LIGMVQPREV PGSKDRRLHS IGCAGRVSAF SETEDGRYMI TLNGMSRFRI TREVSGFTPY LKADVTWDDF GRDLGKTEED PGFQRGAFLD LLRRFFEDQD MRTDWDSLSE AEDELLINSL SMLCPFDPED KQALLEAPSL STRRETLVTL IEFALRGGSS EELLQ
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