| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2894 |
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| Symbol | |
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| ID | 5695752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3476132 |
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| End bp | 3477325 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641265509 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001530774 |
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| Protein GI | 158522904 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.781676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGGT TTGGTAAAAA CAAAATTGTA CCGTCAGCGC TGATTGTGGC GGTGGTGCTG
ACCGGCTTGG TACTGGTTTC CGGGTGCAGG GACAACAACC CGCCCCCCCA GCGCCCGGCC
CCGGAGGTGG GCGTTGTCAC CATCGAAGAA CAGCCGGTGG CCCTGACCAC TGAACTGCCG
GGACGGGCCG CCCCCTTTCT GATGGCGGAC ATCCGGCCCC AGGTCAACGG CATCATTCAG
AAGCGCCTGT TTGAAGAGGG GGCCATGGTA AAGGCCGGCC AGGTACTCTA CCAGATTGAT
CCGGCCCAGT TCGAGGCGGT TTACGCAGCG GCCAAAGCCG CCCTGGATCG ATCGCAATCC
AACCTGGCGT CGGTGCAGGC GCGGGCCGAC CGGTACCGGG AACTGCTGGC GGCAAAAGCG
GTCAGCCAAC AGGACGTTGA TGATGCCGAT GCGGCCCTTT CCCAGGTCCG GGCCGATATC
GAATACTGGA AGTCGGAACT TGAAAAGGCC GGCATCAATC TTAATTATAC ACGGGTGACG
GCCCCCATTT CCGGCCGCAT CGGCCGGTCA TCGGTCACCG CCGGCGCGGT TGTGACGGCC
TACCAGCCCG TGCCGCTGTC CACCATCGTC CAGTTGAATC CCATTTATGT GGATGTGACC
CAGTCATCGT CTGAGCTTTT GCGCTTGGGC CGGGACCTGG AGACCGGCAA GATCACAAAC
GGCACCGACG CGACAAAAAA GGTGCGCATT CTTCTGGAGG ACGGCACGCC CTACCCCCAT
GAAGGCACGC TGCAATTCCG GGACGTGACC GTGGACCCGT CTACCGGATC GTACGTGCTG
CGCGTCAAGG TGCCCAACCC GGAACAGGTG CTGATGCCGG GCATGTTTGT ACGGGCCGTG
GTGATGGAGG GAACGGCGCC CCGGGCCATT CTGGCGCCCC AGCAGGGTGT GGCACGGAAC
ACCAAGGGCG AGCCCCTGGC TCTGGTGGTC AACAGCGACA ACGTGATCAA ACAGCGCATC
CTGACTGTTG AACGGGCCAT CGGCAACCAG TGGCTGGTGC TGTCCGGCCT GTCCGCCGGG
GACCGGGTGG TGGTGGAGGG CCAGTTAAAT ATCCGGCCGG ACATGACGGT CAAGCCCATT
CCTGCGGACA TTCCATCTTC CGGCGAAACG CCCGCACCCG CGCCATCCAA CTGA
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| Protein sequence | MQRFGKNKIV PSALIVAVVL TGLVLVSGCR DNNPPPQRPA PEVGVVTIEE QPVALTTELP
GRAAPFLMAD IRPQVNGIIQ KRLFEEGAMV KAGQVLYQID PAQFEAVYAA AKAALDRSQS
NLASVQARAD RYRELLAAKA VSQQDVDDAD AALSQVRADI EYWKSELEKA GINLNYTRVT
APISGRIGRS SVTAGAVVTA YQPVPLSTIV QLNPIYVDVT QSSSELLRLG RDLETGKITN
GTDATKKVRI LLEDGTPYPH EGTLQFRDVT VDPSTGSYVL RVKVPNPEQV LMPGMFVRAV
VMEGTAPRAI LAPQQGVARN TKGEPLALVV NSDNVIKQRI LTVERAIGNQ WLVLSGLSAG
DRVVVEGQLN IRPDMTVKPI PADIPSSGET PAPAPSN
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