| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2121 |
|---|
| Symbol | |
|---|
| ID | 5694964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2575505 |
|---|
| End bp | 2576485 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264722 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001530002 |
|---|
| Protein GI | 158522132 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000152404 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGA TGATTTCAAC AAAACAGAAG CGAGTTTCAG AAATTGCTCC CGTTCTCTGG
CAACGGCTGG AGAGTTGCGA CCTGTGCCCG CGAAAATGCG GGGTCAACCG GCTGGCCGGG
GAAAAGGGAT TCTGCGCCCT GTCCGGTGAC TGGGTGCCGG TGTCAAGCTT CTGCGCCCAC
CGGGGGGAAG AGCCGGTGCT CTCCGGCCGG GCCGGATCGG GCACGATATT TTTTTCCCAC
TGCAACCTGG GGTGTCTCTT CTGCCAGAAC CACCAGATCA GCGACAACTC GCTGGATCCC
GGCCCCTCCA TGGTTCGCAT CGATGAGCTG GCCCGAATCA TGATTGTCCT GCAGGCCATG
GGGTGTCACA ACATCAATTT TGTCACCCCC ACCCATGTGC TGCCCCACAT TGTGGCGGCC
ATAAAAATCG CCCTGGACCA GGGGCTTGTC CTTCCCCTGG TGTATAACTG CGGCGGATAT
GAAAACGCGG AGGTGATCCG CCTGCTGGAC GGCGTAATGG ATATCTATCT GCCGGACTTT
AAATACATGG ACGGCGCACT GGCCCGCACG TATTCGGCGG CCCCGGATTA TCCGGCGGCC
GCGGCGGCCG CCTTCAAGGA AATGTACCGG CAGGCAGGGA GCGGTCTTGA CATTGACCCG
GCCACGCAAA CGGCACGGCA CGGCATGATC ATCCGCCACC TGGTGCTACC CGGCGGTGTA
AAAAATTCGG TCGATGTGCT GACGTGGATA GCGGACAACC TGTCGCCGAA ACTCCATCTG
TCGCTGATGT CCCAGTACCA TCCACCGGCA GGCCCCCGAA GGCCAGAGCC GCCGCTTGAC
CGCCCGCTTT TTCCCGAAGA GTATGGAGCG GTGTCCGCCA GGGCCGAGTC CCTGGGGTTT
GAAAACGGCT GGTTCCAGGA AATGGAAAGC CATGACGTCT ACCGCCCCGA TTTCAAAAAG
GCCCACCCGT TTGAGGAGTG A
|
|---|
| Protein sequence | MEMMISTKQK RVSEIAPVLW QRLESCDLCP RKCGVNRLAG EKGFCALSGD WVPVSSFCAH
RGEEPVLSGR AGSGTIFFSH CNLGCLFCQN HQISDNSLDP GPSMVRIDEL ARIMIVLQAM
GCHNINFVTP THVLPHIVAA IKIALDQGLV LPLVYNCGGY ENAEVIRLLD GVMDIYLPDF
KYMDGALART YSAAPDYPAA AAAAFKEMYR QAGSGLDIDP ATQTARHGMI IRHLVLPGGV
KNSVDVLTWI ADNLSPKLHL SLMSQYHPPA GPRRPEPPLD RPLFPEEYGA VSARAESLGF
ENGWFQEMES HDVYRPDFKK AHPFEE
|
|---|
| |