| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1979 |
|---|
| Symbol | |
|---|
| ID | 5694819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2394859 |
|---|
| End bp | 2395800 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264577 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_001529860 |
|---|
| Protein GI | 158521990 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0057409 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA CAATGAACTT TGCCATCATC GGAACCGGAG CCGTGGGCGG ATATTACGGC
GGTCTGCTCT GCCGTCACGG GTTTGAGGTC CATTTTTTGC TGCGTGGGGA TTATGTCCAT
GTTCAGGAAA AAGGCCTGAC CATTGACTCA AAGGACGGCA GTTTCCGGTT GAAACAGGTC
AACGCCTATT GCCGCGCATC GGACATGCCC CGGTGCGACG TGGTGATTGT GGCCCTGAAA
ACAACGGCCA ATGATCGGCT GGCCGGCATT CTGCCCCACG TGGTCAAGCC CGGCGGCGTG
GTGGTGGCCC TTCAGAACGG CCTGGGCGTT GAAAAGACGA TTCAGGAGAT CGTCCCTGAT
GCCACGGTGA TCGGGGGCCT GTGTTTTCTG TGCAGCAACA AGATCGGGCC GGGCCATATT
CATCACCTGG ATTTCGGGTC GGTCCGTCTG GGCCAGTACC GGGCCGATGG CGCGGCCGCC
GGCATCACGC CGGAACTGCG GCAGGTGGCT GATGCGTTTT CGGCCGCCGG CATATCGGTG
GACCTGGCCG AAGACCTGGC CCTGGCCCGG TGGCAGAAGC TGGTGTGGAA CATGGCCTTT
AACGGCGTTA CCGTGGTGTT AAACGCCACC ACGGATCAAT TGATGGCCGA TCCTTCGGCC
CTTGCGCTGG TGCGCGGCAT CATGGAAGAG GTGGTGGCCG GCGCCAGGGC CTGCGGGCAT
CCGCTGGATG AAAATTTTAT TGAGATCATG ATCGCGGCCA CAAAAAACAT GGTCGCCTAC
CGGCCCAGCA TGATGCTCGA TTTTGAAGCC GGCAGGGAGC TGGAAGTCGA GGAGATTTAC
CGTCTGCCCA TTTCAATGGC CGCCGCGGCC GGCGTGGCCA TGCCCCGGTC CGAAACCATT
GCCCTACAAC TGGAATTCCT GGACCGCCGG AACCGGGGAT GA
|
|---|
| Protein sequence | MEETMNFAII GTGAVGGYYG GLLCRHGFEV HFLLRGDYVH VQEKGLTIDS KDGSFRLKQV
NAYCRASDMP RCDVVIVALK TTANDRLAGI LPHVVKPGGV VVALQNGLGV EKTIQEIVPD
ATVIGGLCFL CSNKIGPGHI HHLDFGSVRL GQYRADGAAA GITPELRQVA DAFSAAGISV
DLAEDLALAR WQKLVWNMAF NGVTVVLNAT TDQLMADPSA LALVRGIMEE VVAGARACGH
PLDENFIEIM IAATKNMVAY RPSMMLDFEA GRELEVEEIY RLPISMAAAA GVAMPRSETI
ALQLEFLDRR NRG
|
|---|
| |