Gene Dole_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1938 
Symbol 
ID5694778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2341462 
End bp2342196 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID641264536 
Productresponse regulator receiver protein 
Protein accessionYP_001529819 
Protein GI158521949 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAG TACTGATCGT AGACGATGAC GCGGTATCCC GGGGATTGCT GTCGCGGGTG 
ATGAAGCCCT ATGCCGCGGA TTTTGAAATC CTCACTGCCA AAGATGGGGC CGAGGCGGCG
GACATGATGA CCCGGCAGAC CATTGACCTT ATCATCAGCG ACCTTCAGAT GCCGGTGATG
GACGGCTTTC AGCTTCTCGA ATATATCGAT CAGAATTTTC CCGGCACACC GGTCTTCATG
ATGACCGCCT TCAGTTCCAA AGAGACCGAA GAAAAGGCTT ACGCCCTGGG AGCCTTCAAA
TTTTTCGAAA AACCCCTGAA CATGGATGTG CTCACTGACG CCATTTTTGA ACAGCTCAAC
TCCGGCGCTG AAGGCGTCAT GACCGGTATC AGCCTTGCCT CTTTTCTTCA ACTCCTGGAG
ATGGAGCGCA AAACCTGCAC CCTGAAAATC AGCACGCCAA ACAAATCCGG AACCATCTAT
TTCCGCGAAG GGGCCATGAT CAACGCGGCC ACTGACCAGG TCAAGGGACT GCAGGCCGCC
TTTGAGATGC TCTCATGGGA CCAGATCAAA ATAGAGGTCT CCGGTGTTTG TCGCAAGAAG
GACCGGGTGA TCCGCCAGGC ACTGATGAAT ATCCTGATGG AAGGCCTGAA AATAAAAGAC
GAAAAAGATC AGAAGTCACG GCTGCGGCCC CTCACCGATT TTTCTTCCCG GAAAAACGTC
AGGACACTCA GGTAG
 
Protein sequence
MKKVLIVDDD AVSRGLLSRV MKPYAADFEI LTAKDGAEAA DMMTRQTIDL IISDLQMPVM 
DGFQLLEYID QNFPGTPVFM MTAFSSKETE EKAYALGAFK FFEKPLNMDV LTDAIFEQLN
SGAEGVMTGI SLASFLQLLE MERKTCTLKI STPNKSGTIY FREGAMINAA TDQVKGLQAA
FEMLSWDQIK IEVSGVCRKK DRVIRQALMN ILMEGLKIKD EKDQKSRLRP LTDFSSRKNV
RTLR