| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1739 |
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| Symbol | |
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| ID | 5694578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2089047 |
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| End bp | 2090006 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641264336 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001529620 |
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| Protein GI | 158521750 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000870898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTTGC CGGGATGCAG CCTGCCCGGC CTCAAACTGC CGGCCGATGC CACTGACCCG
CTGCGGGAGT TCGTACTGGA GGGCTCAGGC CCCCAGAAAA TCGCCATGGT TTCAGTCAAC
GGCGCCATTA CAGATAAGCC CACCAGGGAT TTCATGTCCC GCAACCATCC GGGCATGCTG
GACGAATTCG TGGCCCAGCT GGCACTGGCA AAAGAGGACC CATCCATCAA AGCCCTGGTG
CTGAAGGTCA ATTCGCCGGG CGGCACCATC ACGGCCAGCG ACATCATGTA CAAGGAGTTG
ATGGATTTCA AACAGCAGAC CGGCAAACCC GTTGTGGCGG CCCTGATGGA TGTGGCAGCC
TCCGGCGGTT ATTACATCTC CCTGCCGGCG GACCACATCC TGGCCCATCC CACCACGCTT
ACCGGGTCAG TGGGCGTGAT TTTTGTCACG CCACGGGTCA GCGGTTTGAT GGACAAGCTG
GGGCTGGACA TGAAAATCCG CAAATCGGGC AAGCACAAGG ACATGGGCTC CCCTTTCCGG
GATACCACGG CGGAGGAGGA CGCTCTGTTT GACGGTATCA TCGACGACAT GGCCGGGCGG
TTTGCCGGGC TGGTGGAGAA GCACCGGGCC GATCAGAAGC CAGACATGGA AAAAATCAAA
ACAGCCCGCA TCTTTACGGC TGACGACGCC CTTTCCGCCG GCCTGGTTGA CCAGGTCGGC
TATCTTGAAG ACGCCCTGGC CCAGGCAAAA AAGATGGCCG GGCTGCCGGA CAACGCGGCC
GTGGTGACCT ATCGCCGGAC CTACTATCCC AACGACACCA TCTACAATAC CCTGGTGACA
CAATACGGGG CCCATTCCGG GGCACTGGTC AACATTGATC TGCTGGAGAG CATGCCCGCG
CTTAAGCCGG GCCTGTACTA CCTGTGGTGG CCCGGCGCCG GGAACAGCGT GCAGCCCTGA
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| Protein sequence | MVLPGCSLPG LKLPADATDP LREFVLEGSG PQKIAMVSVN GAITDKPTRD FMSRNHPGML
DEFVAQLALA KEDPSIKALV LKVNSPGGTI TASDIMYKEL MDFKQQTGKP VVAALMDVAA
SGGYYISLPA DHILAHPTTL TGSVGVIFVT PRVSGLMDKL GLDMKIRKSG KHKDMGSPFR
DTTAEEDALF DGIIDDMAGR FAGLVEKHRA DQKPDMEKIK TARIFTADDA LSAGLVDQVG
YLEDALAQAK KMAGLPDNAA VVTYRRTYYP NDTIYNTLVT QYGAHSGALV NIDLLESMPA
LKPGLYYLWW PGAGNSVQP
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