Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1629 |
Symbol | |
ID | 5694466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1936802 |
End bp | 1938118 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641264224 |
Product | outer membrane efflux protein |
Protein accession | YP_001529510 |
Protein GI | 158521640 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATT TATTCCGCAT TCAGCAGTTA ACCCGGCGGC TGCCGGTTCT TTTCGCACTT GCAGCGGCCG TCCTTTTTGC AACCATACTG CCGTGCGGGC ATTCGTCCGC CGCGGAGACC CTCACGTGGC AGGACTGCGT TCAGGAGGCG TTGGCCCGCC ATCCGGAACT GGCCGTCTCC AGGGAGTCTT TAAACCAGGC CCTGGCAGAC AGGGACATCG CCAAAAGCCC GGGCCGGCCC CAGGTGGCCG CCAACGCGTC CAGCAGCCGC GGCGACCGGG ACGACGCCGC GGCAACCACC TCCCACAGCT TCGGCATCAG CGCCCGGCAG ATGCTCTATG ACGGGAAAAA GACCACCCAC CAGGTTTCCG CGGCCGAGGC AGCCGTCACC TCCCGGCAGT ACACCCATGA TGTCACCTCC TCCCGCATTC GCCTGCAACT GCGCACCGCC TTTGTCGACC TGCTCCACGC GCGGGAGCTG TTAAACATCT CTGAAGAGAT CGCCCGGCGG CGGCGGCAGA ACCTGGAACT GGTAAGGCTT CGCCACGACG CCGGCCGGGA GCATCGCGGC TCCCTGCTGT CGGCCCGGGC CAACGTGGCC CAGGCCGAAT ACGAGATCCG CTCGGCCCGG CGCGAGGTCT CCCTTGCCAT GTGGCGGCTG GCCAGGGAGC TGGGAAGAGA CGGGACCGCG TCAGTAACCG TTGCCGGAGA GCTTTCCGTG CCGCCAGCCG ATGCCGGCAT GCCCGATTTT GAAGCCCTGA CCGCTGACAA TCCCTTTTTA AAAGAGCTGA TCGCTCAAAA AGAGGTGTCC CTGGCGAGCA GGGATGCCGT GAAGTCCGGG TTCTTTCCCC AGGTCTATGC CGATGCATCG GCCGGCAGGA GCGATTCGGA CTGGCCCCCG GACCGGGACC AGTGGTCCGT GGGCCTGTCG GTCTCGGTGC CCCTGTTTGA AGGGGGCAGC CGGTTTGCCG AGATGAGAAA GGCCGGGGCA CGGGTGCGCC AGGCCGAGGC CCAGGCGACA AGCGGCCGGG CTGAAACCCT GCACACCCTG CGCGACGCCT GGATTGCTTT TCAAAACGCC GTGGACCGGG TGGCCGTGGG CCGGGCCTTT GTTGAAGCCT CTGAAGAGCG GGCAAAAATC GCCCAGGTGG AATATTCCAA CGGCCTGATC ACCTTTGACA CCTGGGCCAT CATTGAAGAC GACCTGGAGC GGGACCGGAA AAACTATCTT ACCTTCCTTG CCAACGCCCT GGTGGCTGAA GCTTACTGGG TTCAGGCAAA GGGCGTAACA CTGGAGCATG ACCTTGAAAA AAACTAA
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Protein sequence | MKYLFRIQQL TRRLPVLFAL AAAVLFATIL PCGHSSAAET LTWQDCVQEA LARHPELAVS RESLNQALAD RDIAKSPGRP QVAANASSSR GDRDDAAATT SHSFGISARQ MLYDGKKTTH QVSAAEAAVT SRQYTHDVTS SRIRLQLRTA FVDLLHAREL LNISEEIARR RRQNLELVRL RHDAGREHRG SLLSARANVA QAEYEIRSAR REVSLAMWRL ARELGRDGTA SVTVAGELSV PPADAGMPDF EALTADNPFL KELIAQKEVS LASRDAVKSG FFPQVYADAS AGRSDSDWPP DRDQWSVGLS VSVPLFEGGS RFAEMRKAGA RVRQAEAQAT SGRAETLHTL RDAWIAFQNA VDRVAVGRAF VEASEERAKI AQVEYSNGLI TFDTWAIIED DLERDRKNYL TFLANALVAE AYWVQAKGVT LEHDLEKN
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