| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1563 |
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| Symbol | trpA |
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| ID | 5694400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1861786 |
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| End bp | 1862583 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264158 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001529444 |
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| Protein GI | 158521574 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTA TTACTGAAAC ATTTGACCGC CTGGCCGCAA AAAAAGAAAA GGCCCTTGTG
GGGTTTGTCA CCGCCGGAGA CCCTGCCATT GAAACCTCCG AGGCCATTAT CAGGGCCATG
TGCGAAGCCG GTATCGATAT CCTGGAGCTG GGCGTACCCT TTTCAGACCC CACGGCCGAC
GGGCCGGTGA TCCAGCGCTC TTCCCAGCGG GCCCTTGCCA ATGGAACGAA CCTGCAAACC
GTTTTTGATA TGACGGCCAC CTTGCGCAAA ACATTCCAGG GTCCGATCAT CCTGTTTTCC
TATTACAACC CCATCTTCCG GTATGGAGCG GAAAACTTTT ACCGTGACGC GAAACAGGCC
GGGGCTGACG GGGTCCTGGT GGTGGACCTG CCGCCCGAAG AGTCGGCGGA ACTCACTTCC
TGCTGGAAGG GCGACGATTT TGCCCTGATC CGGCTGCTGG CCCCAACCAC GCCGGACGGG
CGCATCGGGG CCATAGCGGC GTCGGCTTCC GGGTTTCTCT ACCTTGTTTC CATGACCGGG
GTCACGGGCA GCAGCGGGCT GGACACCACC CACATCGCCG ACCTGTGCGC AAAAGTCCAA
CGTCACACCG CGCTTCCCAT CTGTGTGGGC TTTGGCGTGA GCACCGCCGA TGACGTGGCT
AAAATCGCGC AACATGCCGA CGGCGTGGTC ATCGGCAGCG CCTTTGAACG GCTGATCGAA
GAGAGCATCG GCAAACCCGA TATCGCGGGA ATCCTTGCCG AGCGAACACG GGAATACAAA
GCAGCGACAA AGATGTGA
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| Protein sequence | MNRITETFDR LAAKKEKALV GFVTAGDPAI ETSEAIIRAM CEAGIDILEL GVPFSDPTAD
GPVIQRSSQR ALANGTNLQT VFDMTATLRK TFQGPIILFS YYNPIFRYGA ENFYRDAKQA
GADGVLVVDL PPEESAELTS CWKGDDFALI RLLAPTTPDG RIGAIAASAS GFLYLVSMTG
VTGSSGLDTT HIADLCAKVQ RHTALPICVG FGVSTADDVA KIAQHADGVV IGSAFERLIE
ESIGKPDIAG ILAERTREYK AATKM
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